[Numpy-discussion] empty data matrix (are they really empty ?)
Christopher Barker
Chris.Barker at noaa.gov
Thu Dec 14 11:40:43 CST 2006
Sven Schreiber wrote:
>> In the old file I created a matrix on the fly. I know that Numpy and
>> python cannot do that so I found a workaround
numpy can create matrices on the fly, in fact, you are doing that with
this code! The only thing it doesn't do is have a lateral that joins
matrices the way matlab does -- you need to use vstack and the like.
>> First I create the empty matrix
To get better performance, you could create the entire empty matrix, not
just one row -- this is the same as MATLAB -- if you know how big your
matrix is going to be, it's better to create it first with "zeros". In
numpy you can use either zeros or empty - just make sure that if you use
empty, you fill the whole thing later, or you'll get garbage.
Your code:
lev2=empty((1,h))
# you've just created and empty single row
.
.
.
lev2=vstack((lev2,clev))
#now you are creating a whole new array, with one more row than before.
The alternative:
lev2=empty((nstep+1,h)) 3 create the whole empty array
ir=1
for j in arange(1,nstep+2):
a2=gr[arange(ir-1,ir+nstep)]
clev=diag(dot(a2,dot(disper,a2.transpose())))
lev2[j,:] = clev # fill in the row you've just calculated
ir=ir+nstep+1
print lev2
I may have got some of the indexing wrong, but I hope you get the idea.
By the way, if you sent a complete, runnable sample, we can test out
suggestions, and you'll get better answers.
-Chris
--
Christopher Barker, Ph.D.
Oceanographer
Emergency Response Division
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Chris.Barker at noaa.gov
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