[Numpy-discussion] trouble installing on fedora core 5 64 bit

Charles R Harris charlesr.harris at gmail.com
Wed Jun 7 17:11:27 CDT 2006


JJ,

I had that problem, started to put the paths in explicitly, noticed that
the  code should work anyway, deleted my changes, ran again, and it worked
fine.  I can't tell you what the problem was or what the solution was, I can
only say I've seen the same thing on fc5. When you do install, it is also a
good idea to delete the numpy directory in site-packages beforehand.

Chuck

On 6/7/06, JJ <josh8912 at yahoo.com> wrote:
>
> Hello.  I am having some trouble getting numpy
> installed on an AMD 64 bit Fedora 5 machine.  I have
> loaded atlas, blas, and lapack using yum.  I can see
> their library files in /usr/lib64/atlas/ (files such
> as libblas.so.3.0).  But the setup program will not
> run.  I have obtained the latest version of numpy
> using svn co http://svn.scipy.org/svn/numpy/trunk
> numpy.  I have created a site.cfg file containing:
>
> [atlas]
> library_dirs = /usr/lib64
> atlas_libs = lapack, blas, cblas, atlas
>
> But when I try to run python setup.py install it
> appears that none of the libraries are seeen.  I get
> the following error messages and output.  Can anyone
> offer help?  Thanks.
>
>
> [root at fedora-newamd numpy]# python setup.py install
> Running from numpy source directory.
> No module named __svn_version__
> F2PY Version 2_2587
> blas_opt_info:
> blas_mkl_info:
>   looking libraries mkl,vml,guide in /usr/local/lib
> but found None
>   looking libraries mkl,vml,guide in /usr/lib but
> found None
>   NOT AVAILABLE
>
> atlas_blas_threads_info:
> Setting PTATLAS=ATLAS
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib64/atlas but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib64/atlas but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/local/lib but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/local/lib but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib but found None
>   NOT AVAILABLE
>
> atlas_blas_info:
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib64/atlas but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib64/atlas but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/local/lib but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/local/lib but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib but found None
>   looking libraries lapack,blas,cblas,atlas in
> /usr/lib but found None
>   NOT AVAILABLE
>
> /usr/local/numpy/numpy/distutils/system_info.py:1281:
> UserWarning:
>     Atlas (http://math-atlas.sourceforge.net/)
> libraries not found.
>     Directories to search for the libraries can be
> specified in the
>     numpy/distutils/site.cfg file (section [atlas]) or
> by setting
>     the ATLAS environment variable.
>   warnings.warn(AtlasNotFoundError.__doc__)
> blas_info:
>   looking libraries blas in /usr/local/lib but found
> None
>   looking libraries blas in /usr/local/lib but found
> None
>   looking libraries blas in /usr/lib but found None
>   looking libraries blas in /usr/lib but found None
>   NOT AVAILABLE
>
> /usr/local/numpy/numpy/distutils/system_info.py:1290:
> UserWarning:
>     Blas (http://www.netlib.org/blas/) libraries not
> found.
>     Directories to search for the libraries can be
> specified in the
>     numpy/distutils/site.cfg file (section [blas]) or
> by setting
>     the BLAS environment variable.
>   warnings.warn(BlasNotFoundError.__doc__)
> blas_src_info:
>   NOT AVAILABLE
>
> <snip>
>
>
>
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