Can' compile numpy 1.02rc3 on OSX 10.3.9

Markus Rosenstihl markusro at element.fkp.physik.tu-darmstadt.de
Fri Oct 20 06:13:49 CDT 2006


Am 20.10.2006 um 02:53 schrieb Jay Parlar:

>> Hi!
>> I try to compile numpy rc3 on Panther and get following errors.
>> (I start build with "python2.3 setup.py build" to be sure to use the
>> python shipped with OS X. I din't manage to compile Python2.5 either
>> yet with similar errors)
>> Does anynbody has an Idea?
>> gcc-3.3
>> XCode 1.5
>> November gcc updater is installed
>>
>
> I couldn't get numpy building with Python 2.5 on 10.3.9 (although I
> had different compile errors). The solution that ended up working for
> me was Python 2.4. There's a bug in the released version of Python 2.5
> that's preventing it from working with numpy, should be fixed in the
> next release.
>
> You can find a .dmg for Python 2.4 here:
> http://pythonmac.org/packages/py24-fat/index.html
>
> Jay P.
>


I have that installed already but i get some bus errors with that.  
Furthermore it is built with gcc4
and i need to compile an extra module(pytables) and I fear that will  
not work, hence I try to compile myself. Python 2.5 dosent't compile  
either (libSystemStubs is only on Tiger).
The linking works when i remove the -lSystemStubs and it compiled clean.
Numpy rc3 wass also compiling now with python 2.5, but the tests failed:

Python 2.5 (r25:51908, Oct 20 2006, 11:40:08)
[GCC 3.3 20030304 (Apple Computer, Inc. build 1671)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
 >>> import numpy
 >>> numpy.test(10)
   Found 5 tests for numpy.distutils.misc_util
   Found 4 tests for numpy.lib.getlimits
   Found 31 tests for numpy.core.numerictypes
   Found 32 tests for numpy.linalg
   Found 13 tests for numpy.core.umath
   Found 4 tests for numpy.core.scalarmath
   Found 9 tests for numpy.lib.arraysetops
   Found 42 tests for numpy.lib.type_check
   Found 183 tests for numpy.core.multiarray
   Found 3 tests for numpy.fft.helper
   Found 36 tests for numpy.core.ma
   Found 1 tests for numpy.lib.ufunclike
   Found 12 tests for numpy.lib.twodim_base
   Found 10 tests for numpy.core.defmatrix
   Found 4 tests for numpy.ctypeslib
   Found 41 tests for numpy.lib.function_base
   Found 2 tests for numpy.lib.polynomial
   Found 8 tests for numpy.core.records
   Found 28 tests for numpy.core.numeric
   Found 4 tests for numpy.lib.index_tricks
   Found 47 tests for numpy.lib.shape_base
   Found 0 tests for __main__
........................................................................ 
................................Warning: invalid value encountered in  
divide
..Warning: invalid value encountered in divide
..Warning: divide by zero encountered in divide
.Warning: divide by zero encountered in divide
..Warning: invalid value encountered in divide
.Warning: divide by zero encountered in divide
.Warning: divide by zero encountered in divide
.Warning: divide by zero encountered in divide
.Warning: divide by zero encountered in divide
..Warning: invalid value encountered in divide
..Warning: invalid value encountered in divide
..Warning: divide by zero encountered in divide
.Warning: divide by zero encountered in divide
.Warning: divide by zero encountered in divide
.Warning: divide by zero encountered in divide
........Warning: invalid value encountered in divide
.Warning: invalid value encountered in divide
..Warning: divide by zero encountered in divide
........................................................................ 
..............................................Warning: overflow  
encountered in exp
F....................................................................... 
..........Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
.....................Warning: invalid value encountered in sqrt
Warning: invalid value encountered in log
Warning: invalid value encountered in log10
..Warning: invalid value encountered in sqrt
Warning: invalid value encountered in sqrt
Warning: divide by zero encountered in log
Warning: divide by zero encountered in log
Warning: divide by zero encountered in log10
Warning: divide by zero encountered in log10
Warning: invalid value encountered in arcsin
Warning: invalid value encountered in arcsin
Warning: invalid value encountered in arccos
Warning: invalid value encountered in arccos
Warning: invalid value encountered in arccosh
Warning: invalid value encountered in arccosh
Warning: divide by zero encountered in arctanh
Warning: divide by zero encountered in arctanh
Warning: invalid value encountered in divide
Warning: invalid value encountered in true_divide
Warning: invalid value encountered in floor_divide
Warning: invalid value encountered in remainder
Warning: invalid value encountered in fmod
........................................................................ 
........................................................................ 
.................
======================================================================
FAIL: Ticket #112
----------------------------------------------------------------------
Traceback (most recent call last):
   File  
"/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site- 
packages/numpy/core/tests/test_regression.py", line 219, in  
check_longfloat_repr
     assert(str(a)[1:9] == str(a[0])[:8])
AssertionError

----------------------------------------------------------------------
Ran 519 tests in 3.760s

FAILED (failures=1)
<unittest.TextTestRunner object at 0x1545f70>
 >>>


regards
Markus




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