[Numpy-discussion] scipy.test() warnings, errors and failures

mpjohnson@gmai... mpjohnson@gmai...
Mon Jun 25 16:08:05 CDT 2007


Hi, I just installed numpy (1.0.3) and scipy (0.5.2) on a Windows
machine running Python 2.5.1. They both complete installation, and
numpy.test() reports no errors. scipy.test() produces a huge stream
(see below) of warnings, errors (19), and failures (2), however. Also,
there's a deprecation warning when I import scipy. Is this behavior
normal? These appear to be the latest versions of everything.

Thanks,
Matt

Python 2.5.1 (r251:54863, Apr 18 2007, 08:51:08) [MSC v.1310 32 bit
(Intel)] on win32
Type "copyright", "credits" or "license()" for more information.

    ****************************************************************
    Personal firewall software may warn about the connection IDLE
    makes to its subprocess using this computer's internal loopback
    interface.  This connection is not visible on any external
    interface and no data is sent to or received from the Internet.
    ****************************************************************

IDLE 1.2.1
>>> import numpy
>>> import scipy

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\misc\__init__.py", line 25
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
>>> scipy.test()

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\ndimage\__init__.py", line
40
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\sparse\__init__.py", line
9
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\io\__init__.py", line 20
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\lib\__init__.py", line 5
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\linsolve\umfpack
\__init__.py", line 7
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\linsolve\__init__.py",
line 13
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\interpolate\__init__.py",
line 15
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\optimize\__init__.py",
line 17
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\linalg\__init__.py", line
32
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\special\__init__.py", line
22
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\stats\__init__.py", line
15
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\fftpack\__init__.py", line
21
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\integrate\__init__.py",
line 16
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\lib\lapack\__init__.py",
line 93
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\signal\__init__.py", line
17
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\lib\blas\__init__.py",
line 61
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\maxentropy\__init__.py",
line 12
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\__init__.py", line 77
    return ScipyTest(scipy).test(level, verbosity)
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 1 tests for scipy.cluster.vq

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\fftpack\__init__.py", line
21
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\numpy\testing\numpytest.py",
line 408
    suite = obj(mthname)
DeprecationWarning: ScipyTestCase is now called NumpyTestCase; please
update your code
  Found 18 tests for scipy.fftpack.basic
  Found 4 tests for scipy.fftpack.helper
  Found 20 tests for scipy.fftpack.pseudo_diffs
  Found 1 tests for scipy.integrate
  Found 10 tests for scipy.integrate.quadpack
  Found 3 tests for scipy.integrate.quadrature

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\interpolate\__init__.py",
line 15
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 6 tests for scipy.interpolate
  Found 6 tests for scipy.interpolate.fitpack

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\io\__init__.py", line 20
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 4 tests for scipy.io.array_import

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\io\tests\test_mio.py",
line 28
    super(test_mio_array, self).__init__(*args, **kwargs)
DeprecationWarning: ScipyTestCase is now called NumpyTestCase; please
update your code
  Found 28 tests for scipy.io.mio
  Found 12 tests for scipy.io.mmio
  Found 4 tests for scipy.io.recaster

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\lib\blas\__init__.py",
line 61
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 16 tests for scipy.lib.blas
  Found 128 tests for scipy.lib.blas.fblas

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\lib\lapack\__init__.py",
line 93
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 42 tests for scipy.lib.lapack

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\linalg\__init__.py", line
32
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 41 tests for scipy.linalg.basic
  Found 14 tests for scipy.linalg.blas

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\linalg\tests
\test_decomp.py", line 117
    ScipyTestCase.__init__(self, *args)
DeprecationWarning: ScipyTestCase is now called NumpyTestCase; please
update your code
  Found 53 tests for scipy.linalg.decomp
  Found 128 tests for scipy.linalg.fblas
  Found 4 tests for scipy.linalg.lapack
  Found 7 tests for scipy.linalg.matfuncs
Warning: FAILURE importing tests for <module 'scipy.linsolve.umfpack'
from '...\\linsolve\\umfpack\\__init__.pyc'>
C:\Python25\Lib\site-packages\scipy\linsolve\umfpack\tests
\test_umfpack.py:17: AttributeError: 'module' object has no attribute
'umfpack' (in <module>)
Warning: FAILURE importing tests for <module
'scipy.linsolve.umfpack.umfpack' from '...y\\linsolve\\umfpack\
\umfpack.pyc'>
C:\Python25\Lib\site-packages\scipy\linsolve\umfpack\tests
\test_umfpack.py:17: AttributeError: 'module' object has no attribute
'umfpack' (in <module>)
  Found 2 tests for scipy.maxentropy
  Found 397 tests for scipy.ndimage
  Found 6 tests for scipy.optimize

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\optimize\__init__.py",
line 17
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 1 tests for scipy.optimize.cobyla
  Found 4 tests for scipy.optimize.zeros
  Found 4 tests for scipy.signal.signaltools
  Found 96 tests for scipy.sparse

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\special\__init__.py", line
22
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 358 tests for scipy.special.basic

Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\stats\__init__.py", line
15
    test = ScipyTest().test
DeprecationWarning: ScipyTest is now called NumpyTest; please update
your code
  Found 98 tests for scipy.stats
  Found 70 tests for scipy.stats.distributions
  Found 10 tests for scipy.stats.morestats
  Found 0 tests for __main__
...........................................Residual:
1.05006987327e-007
...........Took 13 points.
.........
Warning (from warnings module):
  File "C:\Python25\lib\site-packages\scipy\interpolate\fitpack2.py",
line 457
    warnings.warn(message)
UserWarning:
The coefficients of the spline returned have been computed as the
minimal norm least-squares solution of a (numerically) rank deficient
system (deficiency=7). If deficiency is large, the results may be
inaccurate. Deficiency may strongly depend on the value of eps.
......
Don't worry about a warning regarding the number of bytes read.
....EEEE.E.EE.E.E.EE.E.E.E.EEEEE....................................................F......................................................................................................................................................................................................................................................................................................................................................................................................Result
may be inaccurate, approximate err = 1.82697723188e-008
...Result may be inaccurate, approximate err = 1.50259560743e-010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................Resizing...
16 17 24
Resizing... 20 7 35
Resizing... 23 7 47
Resizing... 24 25 58
Resizing... 28 7 68
Resizing... 28 27 73
................................................Resizing... 16 17 24
Resizing... 20 7 35
Resizing... 23 7 47
Resizing... 24 25 58
Resizing... 28 7 68
Resizing... 28 27 73
......................Resizing... 16 17 24
Resizing... 20 7 35
Resizing... 23 7 47
Resizing... 24 25 58
Resizing... 28 7 68
Resizing... 28 27 73
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................F.Ties
preclude use of exact statistic.
..Ties preclude use of exact statistic.
......
======================================================================
ERROR: check loadmat case 3dmatrix
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case cell
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case cellnest
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case complex
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case double
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case emptycell
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case matrix
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case minus
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case multi
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case object
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case onechar
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case sparse
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case sparsecomplex
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case string
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case stringarray
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case struct
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case structarr
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case structnest
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
ERROR: check loadmat case unicode
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 85, in cc
    self._check_case(name, files, expected)
  File "C:\Python25\Lib\site-packages\scipy\io\tests\test_mio.py",
line 75, in _check_case
    matdict = loadmat(file_name)
  File "C:\Python25\Lib\site-packages\scipy\io\mio.py", line 96, in
loadmat
    matfile_dict = MR.get_variables()
  File "C:\Python25\Lib\site-packages\scipy\io\miobase.py", line 269,
in get_variables
    mdict = self.file_header()
  File "C:\Python25\Lib\site-packages\scipy\io\mio5.py", line 510, in
file_header
    hdict['__header__'] = hdr['description'].strip(' \t\n\000')
AttributeError: 'numpy.ndarray' object has no attribute 'strip'

======================================================================
FAIL: check_y_stride (scipy.lib.blas.tests.test_fblas.test_cgemv)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\lib\blas\tests
\test_fblas.py", line 367, in check_y_stride
    assert_array_almost_equal(desired_y,y)
  File "C:\Python25\Lib\site-packages\numpy\testing\utils.py", line
230, in assert_array_almost_equal
    header='Arrays are not almost equal')
  File "C:\Python25\Lib\site-packages\numpy\testing\utils.py", line
215, in assert_array_compare
    assert cond, msg
AssertionError:
Arrays are not almost equal

(mismatch 16.6666666667%)
 x: array([-5.39065742 +5.39065742j,  1.         +1.j        ,
        3.86268878 +0.13731122j,  3.         +3.j        ,
       -9.09618664+17.09618759j,  5.         +5.j        ],
dtype=complex64)
 y: array([-5.39065742 +5.39065742j,  1.         +1.j        ,
        3.86268878 +0.13731124j,  3.         +3.j        ,
       -9.09618664+17.09618568j,  5.         +5.j        ],
dtype=complex64)

======================================================================
FAIL: check_expon (scipy.stats.tests.test_morestats.test_anderson)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\Python25\Lib\site-packages\scipy\stats\tests
\test_morestats.py", line 57, in check_expon
    assert_array_less(A, crit[-2:])
  File "C:\Python25\Lib\site-packages\numpy\testing\utils.py", line
235, in assert_array_less
    header='Arrays are not less-ordered')
  File "C:\Python25\Lib\site-packages\numpy\testing\utils.py", line
215, in assert_array_compare
    assert cond, msg
AssertionError:
Arrays are not less-ordered

(mismatch 100.0%)
 x: array(1.9482886531944246)
 y: array([ 1.587,  1.934])

----------------------------------------------------------------------
Ran 1596 tests in 20.720s

FAILED (failures=2, errors=19)
<unittest.TextTestRunner object at 0x022F6B90>



More information about the Numpy-discussion mailing list