[Numpy-discussion] huge array calculation speed

Charles R Harris charlesr.harris@gmail....
Thu Jul 10 21:44:56 CDT 2008


On Thu, Jul 10, 2008 at 5:48 PM, Andrew Dalke <dalke@dalkescientific.com>
wrote:

<snip>


> You can also grab the KDTree from Biopython, which is implemented in C.
>
>   http://www.biopython.org/DIST/docs/api/Bio.KDTree.KDTree'-module.html<http://www.biopython.org/DIST/docs/api/Bio.KDTree.KDTree%27-module.html>
>
> It was designed for just this task.
>

Looks nice, has a BSD type license, but uses Numeric :( Oh well, a little
fixing up should do the trick.

Chuck
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