[Numpy-discussion] Efficient orthogonalisation with scipy/numpy

Gael Varoquaux gael.varoquaux@normalesup....
Tue Jan 19 15:12:36 CST 2010


On Tue, Jan 19, 2010 at 02:58:32PM -0600, Robert Kern wrote:
> > I am not sure that what I am doing is optimal.

> If confounds is orthonormal, then there is no need to use lstsq().

>   y = y - np.dot(np.dot(confounds, y), confounds)

Unfortunately, confounds is not orthonormal, and as it is different at
each call, I cannot orthogonalise it as a preprocessing.

Thanks,

Gaël


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