[Numpy-discussion] First shot at svn->git conversion

Pauli Virtanen pav@iki...
Wed Jul 28 03:56:51 CDT 2010


Wed, 28 Jul 2010 12:17:27 +0900, David Cournapeau wrote:
[clip]
>>>> http://github.com/numpy/numpy_svn
> 
> I put a new repostory (same location)

Compared this against git-svn produced repository. There are a number of 
commits missing from the early history, apparently because numpy trunk 
was moved around in SVN.

Corresponding log messages from a diff between `git log --oneline|sed -e 
's/^........//'` in the two branches:

...
 Alter shape setting.
 Moving newcore to trunk
-Added f2c.h to depends.
-Fix array scalars __array_struct__ interface
-Added Masked Array tests.
-Minor memory leaks
-Fix array_structinterface bug
-Added Paul's enhanced masked arrays.
-Fix up bad commit.
-Changed Transpose C-API. Cleaned up memory leaks.
-Beginnings of faster scalar math.
-Fixed put and putmask functions to not work for nonarrays.
-Switched order of put and putmask.
-Fix int stop -> intp stop in parse_subindex
-Fixed up slice parsing to support larger integers on 64-bit platforms.
-Created a better Copy function that can copy FORTRAN order too.
-Fixed another leak.
-Fixed-up array interface.
-Comment changes.
-Remove PyArrayMapIter_Type from user space.
-Updated FillWithScalar.
-removed MapIter commands from C-API
-More valgrind-found bugs.
-valgrind-found fixes and adjust indexing for object arrays.
-11/4/05 -- CJH -- Moved variable declaration to make it consistent with
-Fixed some type issues.
-Fixed back the test to cover all of scipy.
-Added flexible support for Choose.
-Found and fixed Put Object bug.
-Disable problem test.
-Small fixes for Intel Compiler class - tested and builds correctly
-Raise error for iteration over scalar.
-Fixed problems with non-existent attributes in array interface.
-Added Intel C Compiler class.
-Comment changes, and change read to write in PyArray_Dump
-Fixed bug in getfield, and some consistency issues.
-Added ability to create arrays of user-defined type using the typeobjec
-Altered flexible types so that NotImplemented is raised in case another
-Updated PyArray_Zero and PyArray_One.
-Add missing variable declaration
-Fixed some array interface issues.
-Comment cleanup.
-CJH -- 11/2/2005 -- Modified the nbytes dictionary to return values in 
-added support for __array_struct__
-Added nbytes attribute and nbytes dictionary
-Fixed Concatenate to use new ArrayType interface so flexible arrays are
-Update Blitz++ included with weave to 0.9 (which was released 2005-10-1
-Update Blitz++ included with weave to 0.9 (which was released 2005-10-1
-Reapplied patch to interpret sequences more cautiously.
-Reverted the PySequence_Check patch.  DOK matrices should be fixed inst
-Changed array_fromobject() to treat failure of the Array_FromSequence()
- r723@Blasphemy:  kern | 2005-11-01 01:07:20 -0800  scipy_distutils -> 
-Added ISALIGNED macro and documentation update.
-Fixed to allow reflected operators instead of OBJECT addition.
- r707@803636f3:  kern | 2005-10-31 13:19:55 -0800  Fix put() typo
-Added more attribute access to flags object.
-Allow flags dictionary attribute access
-Added bool8 type.
-Fixed small typo
-Fixed incorrect usage of PyArray_CanCastSafely.
-Save and restore sys.displayhook around running tests, so that doctests
-Don't use deconvolve for polydiv, as that requires scipy.signal to be i
-Don't try to handle ImportError in deconvolve when scipy.signal doesn't
-Cosmetics with NO_SCIPY_IMPORT.
-Fixed nx -> NX
-Change to using PY_ARRAY_TYPES_PREFIX instead of PYARRAY_TYPES_PREFIX, 
-Make it easier for extension writers. If PYARRAY_TYPES_PREFIX is define
-some clean up for scimath.py, use type objects instead of typechars
-small whitespace
-Convert polynomial to use type objects instead of old Numeric typechars
-TLC for polynomial.py: cleanup, poly1d class is now new-type, and unitt
-Give ufunclike some TLC. Cleanup, add docstrings and unit tests. The un
-Whitespace cleanup and make classes new-type
-Altered vectorize to allow default arguments in function.
-More cosmetic changes.
-Added PyUFunc_On_Om to UFunc C-API
-Some refactoring - poly1d is a new-style class now - no import * now - 
-Replaced PyArray_FromDimsAndData with PyArray_SimpleNewFromData.
-Cosmetic changes mainly. Remove unused itemsize from scanfunc arguments
-Moved f2py2e to f2py.
-change PyArray_Scalar to take a void * instead of char *, and some whit
-Change PyArray_Scalar to take a void * instead of char *
-Whitespace cleanup
-Add __all__ statements to base.{oldnumeric,numeric,numerictypes} This s
-Fixed SimpleNewFromData to use correct flags.
-Fixed complex to bool issues.
-Introduced PyArray_SimpleNewFromData as a replacement to PyArray_FromDi
-Removed unused requirement that compare deal with misbehaved arrays.
-Small cleanups in arrayobject.h
-Altered default flags in PyArray_BufferConverter and fixed signbit and 
-Fixed problem with correlate.
-Fix 0-d array indexing.
-Fix for rank-0 arrays.  Now a[0] = 1 throws an IndexError, just like re
-More docstring fixes for mean() and sum().
-Trivial changes to a.mean() docstring
-Improved docstrings:   * Fuller explanation of default casting behaviou
-Fixed get_lib_source_files bug.
-Made ScalarType tuple so that it could be 2nd argument to isinstance.
-Fixed assert_approx_equal(0,0) failure bug.
-Fixed stepping issue for length-1 arrays.
-Fixed problem with temporary allocation in PyArray_Transpose.
-Bug fixes.
-Fixed tests on opteron
-Fixed intent(in,out) array shape when copy is made.
-Setting __scipy_version__.
-Finished impl. of new array_from_pyobj. Updates and clean up. Removed a
-Fixes to array_ass_item and array_item so that other uses of these besi
-Cosmetic fixes.
-More weave fixes.
-Added more types to weave.
-Fixed string_from_pyobj to handle multi-length string conversion.
-Fix segfault with Character arrays.
-Fix toscalar so it only works when a.size == 1
-Reimplemented array_from_pyobj using scipy.base CAPI.
-Unittests for new array_from_pyobj in f2py.
-Fixed default typecode on copy.
-Fixed docstring (line-break problem)
-Bug fix and new test cases for average()
-Cleaned up exceptions:  * improved consistency in exception strings; re
- r583@Blasphemy:  kern | 2005-10-23 17:04:42 -0700  Try to mask key wit
-More fixes to remove allowing numbers for types.
-Removed allowing numbers for typecodes.
-EJS: disabled the stricter type checking on boolean values for now, unt
-EJS: Patch to use proper True and False values rather than 1 and 0.  Th
-Fixed bug in CDOUBLE_setitem
-added common_type
-Remove useless size change.
-Fixed memory alignment issue in frompyfunc
-Added a new test for isinf.
-Fixed up array interface
-Make sure errorobj is NULL.
-Applied Ted Horst's patches.
-Tried different ones algorithm.  Wasn't faster.
-Added .fill method.
-Set memory to zero when using SimpleNew
-Changed lookup to a single list.
-Silly error in _ScalarAsCtype.
-Transpose fixes --- flags needed fixing before calling copy_ND_array.
-Changed default rtype for Bool and low-bit integers
-Replaced PyArray_FromDimsAndData with PyArray_New. 2nd try.
-Replaced PyArray_FromDimsAndData with PyArray_New.
-Fix flags and don't set mem to 0 in FromDimsAndData
-Changed default on matrix to copy=1
-Allow array scalars in f2py conversions.
-Clean up, updated initforcomb for 64 bit platform.
-Impl. finfo as a new-style singleton class. Added singleton tests.
-Dont define ushort,uint ulong when _BSD_SOURCE.
-Fixed intp formats.
-Fixed INTP_FMT when SIZEOF_PY_INTPTR_T == SIZEOF_LONG.
-Fixed intp formats.
-Fixed typedef, part of int->intp changes.
-Fixed missing type.
-Using PyArray_ITEMSIZE instead of ->descr->elsize
-Changed int to intp for array dimensions and strides.
-Changes to fix int -> intp
-Removed character conversion from convertcode.
-Added NO_IMPORT to list of workable defines.
-Clean up -- removed Numeric and numarray specific code.
-If env.variable NO_SCIPY_IMPORT is defined then importing scipy package
-PyArray_API management copied from Numeric.
-scipy include_dirs are set by scipy.distutils, no need to do that in f2
-Fixed segfaults from f2py generated modules: fortranobject needed impor
-Fixed bug: items in data statement may be separated by commas.
-Generalized newshape for adding and removing ones.
-Fixed so that setting shape works even for discontiguous arrays as long
-Additional support for gnu compiler on 64-bit platform.
-Fixed return_integer tests.
- r409@Blasphemy:  kern | 2005-10-14 20:26:04 -0700  Comment out unused 
- r391@Blasphemy:  kern | 2005-10-14 19:54:35 -0700  Fix RandomState.ran
-removed % from FMT string
-Impl. hooks to import scipy packages with info.py files.
-Fix remaining compile warnings (except for one) in mtrand by using a po
-Support for setuptools, if found. You can use python setup.py bdist_egg
-Few more fixes for compiler warnings for mtrand. I'm still getting 'war
-Cleaned up a few things in arrayobject.h
-Initial hooks for package imports.
-Doc updates and initial hooks for scipy imports.
-Fixed the installation path for __svn_version__.py.
-Updated f2py/weave setup.py files.
-Clean up.
-Fixed more add_data_dir/add_data_files bugs.
-Fixed __array_data__ interface.
-Removed mapiter from Python exposure.
-Fixes made necessary by change to asarray.
-Fixed subclass PyArray_New error segfault.  Updated f2py for newscipy (
-Fixed can cast safely.
-Fixed so that array always returns an array object.
-Fixed typo.
-Regenerated mtrand.c with a version of Pyrex which emits code that comp
-Fixed typo.
-Enabled scipy.distutils tests.
-Dropped install_init_py file and generating __core_config__.py in order
-Dropped install_init_py file and generating __core_config__.py in order
-Made svn version available to main setup.py script.
-Added initial scipy.basic.tests site.
-Renamed test_limits to test_getlimits.
-Renamed test_basic to test_umath.
-Shut up scipy.test(..) on missing tests. Use scipy.test(verbosity=2) to
-Fixed getting base svn version number - avoiding importing base while i
-Fixed getting base svn version number - avoiding importing base while i
-Moved importing scipy modules from __init__.py to install__init__py.
-Updated thank yous..
-Added more doc-strings.
-change floor precision of small-bit integers
-Added mingw32ccompiler and lib2def to support building with Python 2.3 
-Fixed remainder to behaved like Python.
-Fix buglet in set_numeric_ops
-Added tuple argument support to add_data_dir.
-Moved back to 0.4.2
-Moved doc to subdir of scipy
-Updated version after beta tag
-Fixed memset to 0 in dotblas.
-Fixed memset to 0 in dotblas.
- r328@Blasphemy:  kern | 2005-10-11 19:50:41 -0700  matrix.py fixes and
- r327@Blasphemy:  kern | 2005-10-11 19:49:52 -0700  Missing self.
-Fixed getting things from scipy.linalg
-cookedm doing test commit
-Added new user.
-Fixed flags problem on array_interface conversion.
-Removed comments.  Fixed can_cast so that 64-bit integer can be cast sa
-Fixed long double unary func problem.
-10/11/05 -- CJH -- Commented out diagnostic print statement.
-Added ndenumerate.  Some print statements for debugging on 64-bit
-test commit
-test change
-Fixed typo
-Print statements for 64-bit debug.
-Fixed scalar stuff again.
-Infinite recursion for long doubles.
-Removed deleted mtrand routines from scipy/corelib/setup.py and fixed r
- r300@Blasphemy:  kern | 2005-10-09 09:54:11 -0700  Remove dependency o
-More fixes for 64-bit systems.
-Fixed loop->bufcnt for 64-bit fixes.
-Fixed off-by-one at end problem with fromfile text files.
-Added comments
-Fixed backwards compatibility with Numeric on 64-bit machines.
-Fixes to get core version working.
-Fixed typo and moved __svn_version__ for core
-More information on flags...
-Added a blank README file for rpm
-Improve the array docstring a bit.
-Fix use of PyArray_New in PyArray_FromDims
-Some printing fixes.
-More 64 bit fixes.
-Fixed some typecode initilization warnings.  Made core libraries access
-Minor changes
-Moving DISTUTILS.txt to newcore/doc.
-Moved extra modules to basic
-Minor formatting changes.
-Fixed formatting.
-Fixed up one change in PyArray_New
-Added some simple CAPI documentation.
-Fixed more intp issues.
- r206@Blasphemy:  kern | 2005-10-07 03:12:29 -0700  Okay, for real this
-Finished delting random.
-Deleted random package.
- r201@Blasphemy:  kern | 2005-10-07 02:46:04 -0700  Don't need this any
-More 64-bit fixes.
-More checks for SIZEOF_LONGLONG==SIZEOF_LONG
- r188@Blasphemy:  kern | 2005-10-07 02:37:24 -0700  Move scipy.stats to
-Fixed import problem.
-Added Inf to base
-Some more fixes
-Fixed missing intp's
-Get rid of rfftfreq and add random.
-Trial run of random...
-Some f2py fixes
-Fixed up add_library for a bit.
-Fixed up fftpack a bit.  Don't want to conflict with scipy's use of rff
-Added helper.py from scipy.
- r165@Blasphemy:  kern | 2005-10-06 22:02:09 -0700  More distributions!
- r164@Blasphemy:  kern | 2005-10-06 22:01:39 -0700  Typo
-Fixed vectorize segfault...
-Fixed issues with threading...
-Added optimization for array_subscript and eleminated threaded support 
-Added more COMPATIBILITY info.
-Added compatibility information
-Fixed tests.
-Fixed some BOOL-related bugs.  BOOLs are now cast to their correct type
-Fixed remaining problems with casting buffer sizes..
- r107@Blasphemy:  kern | 2005-10-05 04:21:41 -0700  Activate apply_alon
- r104@Blasphemy:  kern | 2005-10-05 04:20:16 -0700  Fix apply_along_axi
- r88@Blasphemy:  kern | 2005-10-04 07:03:42 -0700  Some fixes to code a
-Added feature that output arrays less than bufsize make temporaries...
-Fixed some more bugs
-Moved inclusion of files from MANIFEST.in to proper setup.py files.
-Fixed object put bug..
- r85@Blasphemy:  kern | 2005-10-04 03:56:27 -0700  Ahem
- r84@Blasphemy:  kern | 2005-10-04 03:55:47 -0700  methodize take() and
- r82@Blasphemy:  kern | 2005-10-04 03:25:34 -0700  defined(darwin) -> d
-Added extra_info kw to add_extension method. Cleaned corelib setup.py.
-Added cblas.h.
-Improved logic so sequence can act like tuple for advanced indexing as 
-Made sure that arbitrary sequences (smaller than MAX_DIMS) with slice o
-Fixed Broadcasting problem introduced by previous fixes...
-Fixed segfaults in buffered casting when castsize was different than bu
 Testing new user
 Testing new user
-Several fixes.
-Fix problem with uninitialized memory in _dotblas.  Changed old C-API t
-Fixed bug in umath absolute.
-Fixing some linalg bugs...
-Improved logic.
-One minor change to sdist.
-Fixed setup.py to add extensions when sdist is run
-Fixes by Eric Firing..
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1147 94b884
-Matrix indexing weirdness
-Simpler names in fftpack
-Removed sign and round as methods -- more like ufuncs
-Add error checking for object ufuncs.
-Improve overflow detection.
-Altered error detection to use raiseexcept when appropriate.  Also, cle
-Fixed some casting rule issues.
-Impl. atanhf and using it for detecting HAVE_INVERSE_HYPERBOLIC_FLOAT.
-Added two to TEST_COMMIT
-Testing fperez commit
-Define atanhf,asinhf,acoshf when missing (like in mingw32).
-Fixed config_cmd.check_func call bugs that used to return always True.
 Fix checking Python C API return values in fastumathmodule.c:_scipy_get
-Exposing scipy.test(..), scipy.base.test(..) functions.
-Fixed and improved scipy.distutils.
-Removed Numeric dependence.
-Making sure it committed
-Removed Numeric dependence.
-Fixing header.
-Removed bad define.
-Fixed compatibility issues.
-Pearu can write.
-Final changes..
-Removed obsolete test-site.
-Added f2py2e as scipy.f2py, improved scipy.distutils, fixed setup.py fi
-Changed names from axxxxx to xxxx_ for types that shadow builtin types.
-Added test_commit file
-More thanks...
-Added Stephen Walton's patch for absoft.py
-Fixed richcmp inheritance.
- r3539@Blasphemy:  kern | 2005-09-29 03:12:18 -0700  Bit of a merge con
- r3532@Blasphemy:  kern | 2005-09-29 03:08:25 -0700  More test fixes
- r3531@Blasphemy:  kern | 2005-09-29 02:05:01 -0700  Restoring tests
-Added a can_cast Python function.
-Eliminated random_lite
-Simplified scalar type checking.
- r3529@Blasphemy:  kern | 2005-09-29 00:30:52 -0700  Remove mconf_{BE,L
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1109 94b884
- r3519@Blasphemy:  kern | 2005-09-28 22:56:10 -0700  mtrand pickle supp
- r3509@Blasphemy:  kern | 2005-09-27 22:50:18 -0700  mtrand fixes
-No pre-computing limits in getlimits.py
-improving a.flags
-Updated flags attribute to special dictionary.
-Updated flags attribute to special dictionary.
-a.flags returns fancy array-connected dictionary.
-Fixed mixed-type array scalar computation issues.
-Don't shadow builtins anymore.
-Fixed bugs.
-Changes..
-Altered string and unicode array scalar types so they inherit from Pyth
-Eliminated random_lite library
- r3493@803638d6:  kern | 2005-09-27 19:52:10 -0700  get_scipy_include()
- r3492@803638d6:  kern | 2005-09-27 19:03:06 -0700  Update scipy.stats 
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1093 94b884
- r3476@803638d6:  kern | 2005-09-26 23:37:30 -0700  Added proper __deal
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1091 94b884
- r3471@803638d6:  kern | 2005-09-26 17:50:29 -0700  Ensured that mtrand
- r3470@803638d6:  kern | 2005-09-26 17:50:04 -0700  Don't install heade
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1088 94b884
- r3463@803638d6:  kern | 2005-09-26 14:31:52 -0700  Fix for blank math 
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1086 94b884
- r3165@803638d6:  kern | 2005-09-26 01:31:46 -0700  Use optimized LAPAC
- r3164@803638d6:  kern | 2005-09-26 01:27:54 -0700  Added scipy.lib.mtr
- r3163@803638d6:  kern | 2005-09-26 01:26:04 -0700  Fix compile flags f
- r3162@803638d6:  kern | 2005-09-26 01:25:20 -0700  Comment out faulty 
-Fix Accelerate.framework flags
-Deleted sub-package manifests
-Getting ready to release beta.
-Added f2py2e -- not tested.
-Added cvs version 1.46.23.2019 of f2py2e to svn
-Added thanks file
-Don't register multiple copies.
-Added simple type registration system.
-Fixed some remaining problems.
-Removed redundant testing.
-Changed OWN_DATA to OWNDATA
-Changed new typedef bool to Bool throughout.
-Defines for backward compat C-API
-Added a cross index function
-Return Long integer on size only if necessary.
-Return Long integer on size only if necessary.
-Allow use of generic type objects for instancing arrays -- use standard
-Fixed nasty shape setting bug.
-Moved weave to be a sub-package of scipy (so as not to conflict with an
-Moved weave
-Added weave.
 Hopefully fixed segfault on Python2.4 and windows
-Adding weave and test
-Getting weave setup
-Fixed up for release.
-Moving back to simple Numeric interface.
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1055 94b884
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1054 94b884
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1053 94b884
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1052 94b884
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1051 94b884
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1050 94b884
-git-svn-id: http://svn.scipy.org/svn/numpy/branches/newcore@1049 94b884
 Testing a new user created with Virtualmin
 Testing a new user created with Virtualmin
 Testing a new user created with Virtualmin
@@ -5958,60 +5521,6 @@
 Testing a new user created with Virtualmin
-Altered so that ndarray inherits from ndbigarray which does not export 
-Fixed fortran ravelling issues.
-Added more missing files
-Added missing setup.py
-Minor comment additions.
-Fixed ufunc error handling.
-Added ufunc attributes.
-added hashability of scalars, and fixed printing of large integers.
-Added missing __init__ files
-More fixes.
-Remove stray print.
-problematic MIN removed.
-Fixed up limits
-Found problem with reshape.
-Making more consistent.
-Fixing some array scalar inconsistencies.
-Adding core scipy functions
-Converting masked arrays
-Fixed more bugs.
-Fixed PyArray_Copy when swapping needed.  Removed PyArray_CopyArray (ma
-Improving convert code.
-Fixed _isnan
-Improved isinf if platform doesn't provide.
-Even more simplifications to isinf macro
-Reworked isinf isnan macros a bit.
-Added isnan, isinf, isfinite, and signbit
-moved fft back to fftpack
-Checked that lapack_lite sources build if needed.
-Seems to be completish
-Added lapack (if libs already present)
-Added fft.
-Many fixes.
-Added _dotblas install
-Added ldexp, frexp, and modf to ufuncs
-Added ma hook.
-Finished new _dotblas.c
-Added PyArray_ArrayType
-Fixing added Numeric
-Moving Numeric to newcore
-Added EnsureArray to C-API and used it to clean up some method calls
-SVN version builds
-Adding scipy.base
-Adding scipy.base
-Adding scipy.base to SVN
-Moving things under scipy
-Moving things to live under scipy
-Added new distutils
-Fixing for new distutils
-Trying to delete CodeGenerators
-Adding base
-Added base
-renamed directories
-Creating a branch for the new scipy_core
 Updated for weave support for numarray.
 Testing oliphant account
 Testing oliphant account
@@ -6950,4 +6459,3 @@
 added build_py module
 split scipy_test off into its own module.
 factored out the scipy specific distutils code into a scipy_distutils p
-New repository initialized by cvs2svn.



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