[Numpy-discussion] How to fix the diagonal values of a matrix

josef.pktd@gmai... josef.pktd@gmai...
Tue Mar 16 14:39:52 CDT 2010


On Tue, Mar 16, 2010 at 1:57 PM, Keith Goodman <kwgoodman@gmail.com> wrote:
> On Tue, Mar 16, 2010 at 7:43 AM, Keith Goodman <kwgoodman@gmail.com> wrote:
>> On Tue, Mar 16, 2010 at 5:56 AM,  <josef.pktd@gmail.com> wrote:
>>> On Tue, Mar 16, 2010 at 9:43 AM, gerardo.berbeglia <gberbeglia@gmail.com> wrote:
>>>>
>>>> How can i take out the diagonal values of a matrix and fix them to zero?
>>>>
>>>> Example:
>>>>
>>>> input: [[2,3,4],[3,4,5],[4,5,6]]
>>>>
>>>> output: [[0,3,4],[3,0,5],[4,5,0]]
>>>
>>> assuming a is square
>>>
>>> a[range(len(a)),range(len(a))] = 0
>>>
>>> see also np.diag
>>>
>>> Josef
>>
>> Or, if you need speed, here's the fast way:
>>
>> a.flat[::4] = 0
>>
>> or more generally
>>
>> a.flat[::a.shape[0]+1] = 0
>
> Oh, I see that fill_diagonal is in numpy 1.4. So:
>
>>> a = np.array([[2,3,4],[3,4,5],[4,5,6]])
>>> np.fill_diagonal(a, 0)
>>> a
>
> array([[0, 3, 4],
>       [3, 0, 5],
>       [4, 5, 0]])

it looks like there are a lot of functions in numpy
np.source(np.fill_diagonal) shows it's the same as your previous version

this (seems to) work for non-square nd arrays with ndim>1:

>>> a = np.ones((2,3,4))
>>> a[[range(min(a.shape))]*a.ndim] = 0
>>> a
array([[[ 0.,  1.,  1.,  1.],
        [ 1.,  1.,  1.,  1.],
        [ 1.,  1.,  1.,  1.]],

       [[ 1.,  1.,  1.,  1.],
        [ 1.,  0.,  1.,  1.],
        [ 1.,  1.,  1.,  1.]]])
>>> a = np.ones((4,5))
>>> a[[range(min(a.shape))]*a.ndim] = 0
>>> a
array([[ 0.,  1.,  1.,  1.,  1.],
       [ 1.,  0.,  1.,  1.,  1.],
       [ 1.,  1.,  0.,  1.,  1.],
       [ 1.,  1.,  1.,  0.,  1.]])

Josef

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