[Numpy-discussion] failure to build

Amos Anderson nitroamos@gmail....
Mon Oct 10 14:27:36 CDT 2011


hello --

i'm trying to build numpy-1.6.1. so far, it works on several machines
that i've tried, but now it's failing. I put some details on the
machine below. I tried to change the compiler, but setup.py objected
to the things I tried (--compiler=g++4, --compiler=icc).

thanks for any advice!

Amos.



building 'numpy.core.multiarray' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g
-fwrapv -O3 -Wall -Wstrict-prototypes -fPIC

creating build/temp.linux-x86_64-2.7/numpy/core/src/multiarray
compile options: '-Inumpy/core/include
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
-Inumpy/core/src/npymath -Inumpy/core/src/multiarray
-Inumpy/core/src/umath -Inumpy/core/include
-I/home/amosa/triad/tools/python/include/python2.7
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/multiarray
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/umath -c'
gcc: numpy/core/src/multiarray/multiarraymodule_onefile.c
numpy/core/src/multiarray/descriptor.c: In function
`_convert_divisor_to_multiple':
numpy/core/src/multiarray/descriptor.c:606: warning: 'q' might be used
uninitialized in this function
numpy/core/src/multiarray/einsum.c.src: In function
`float_sum_of_products_contig_outstride0_one':
numpy/core/src/multiarray/einsum.c.src:852: error: unrecognizable insn:
(insn:HI 440 228 481 14
/usr/lib/gcc/x86_64-redhat-linux/3.4.6/include/xmmintrin.h:915 (set
(reg:SF 148)
        (vec_select:SF (reg/v:V4SF 67 [ accum_sse ])
            (parallel [
                    (const_int 0 [0x0])
                ]))) -1 (insn_list 213 (nil))
    (nil))
numpy/core/src/multiarray/einsum.c.src:852: internal compiler error:
in extract_insn, at recog.c:2083
Please submit a full bug report,
with preprocessed source if appropriate.
See <URL:http://bugzilla.redhat.com/bugzilla> for instructions.
Preprocessed source stored into /tmp/ccWyirX3.out file, please attach
this to your bugreport.
numpy/core/src/multiarray/descriptor.c: In function
`_convert_divisor_to_multiple':
numpy/core/src/multiarray/descriptor.c:606: warning: 'q' might be used
uninitialized in this function
numpy/core/src/multiarray/einsum.c.src: In function
`float_sum_of_products_contig_outstride0_one':
numpy/core/src/multiarray/einsum.c.src:852: error: unrecognizable insn:
(insn:HI 440 228 481 14
/usr/lib/gcc/x86_64-redhat-linux/3.4.6/include/xmmintrin.h:915 (set
(reg:SF 148)
        (vec_select:SF (reg/v:V4SF 67 [ accum_sse ])
            (parallel [
                    (const_int 0 [0x0])
                ]))) -1 (insn_list 213 (nil))
    (nil))
numpy/core/src/multiarray/einsum.c.src:852: internal compiler error:
in extract_insn, at recog.c:2083
Please submit a full bug report,
with preprocessed source if appropriate.
See <URL:http://bugzilla.redhat.com/bugzilla> for instructions.
Preprocessed source stored into /tmp/ccWyirX3.out file, please attach
this to your bugreport.
error: Command "gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g
-fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Inumpy/core/include
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
-Inumpy/core/src/npymath -Inumpy/core/src/multiarray
-Inumpy/core/src/umath -Inumpy/core/include
-I/home/amosa/triad/tools/python/include/python2.7
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/multiarray
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/umath -c
numpy/core/src/multiarray/multiarraymodule_onefile.c -o
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/multiarraymodule_onefile.o"
failed with exit status 1







cat /etc/redhat-release
Red Hat Enterprise Linux AS release 4 (Nahant Update 4)

    $ svnversion . /repos/svn/trunk
    4168


gcc: _configtest.c
gcc -pthread _configtest.o -L/usr/lib64 -lf77blas -lcblas -latlas -o _configtest
ATLAS version 3.7.11 built by root on Mon Jun  5 10:14:12 EDT 2006:
   UNAME    : Linux intel1.lsf.platform.com 2.6.9-34.ELsmp #1 SMP Fri
Feb 24 16:56:28 EST 2006 x86_64 x86_64 x86_64 GNU/Linux
   INSTFLG  :
   MMDEF    : /export/madison/src/roll/hpc/BUILD/ATLAS/CONFIG/ARCHS/P4E64SSE3/gcc/gemm
   ARCHDEF  : /export/madison/src/roll/hpc/BUILD/ATLAS/CONFIG/ARCHS/P4E64SSE3/gcc/misc
   F2CDEFS  : -DAdd__ -DStringSunStyle
   CACHEEDGE: 393216
   F77      : /usr/bin/g77, version GNU Fortran (GCC) 3.4.5 20051201
(Red Hat 3.4.5-2)
   F77FLAGS : -fomit-frame-pointer -O -m64
   CC       : /usr/bin/gcc, version gcc (GCC) 3.4.5 20051201 (Red Hat 3.4.5-2)
   CC FLAGS : -fomit-frame-pointer -O3 -funroll-all-loops -m64
   MCC      : /usr/bin/gcc, version gcc (GCC) 3.4.5 20051201 (Red Hat 3.4.5-2)
   MCCFLAGS : -fomit-frame-pointer -O -m64
success!


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