[Numpy-discussion] Numpy 1.6.1 installation problem

Martin Raspaud martin.raspaud@smhi...
Wed Feb 15 06:29:28 CST 2012


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On 14/02/12 16:48, Bruce Southey wrote:
> On 02/14/2012 09:40 AM, Olivier Delalleau wrote:
>> Really not an expert here, but it looks like it's trying various
>> compilation options, some work and some don't, and for some reason
>> it's really unhappy about the one where it can't find Python.h.
>> Maybe add /usr/include/python2.6 to your CPATH, see if that helps (and
>> make sure permissions are correctly set on this directory)? However,
>> it may very well be something else....

> This there a reason why you are using the fcompiler option?
> If not just try the basic approach:

> $ python setup.py build


Hi guys,

Thanks for the help. I'm getting past this error thanks to the CPATH
environment variable.

Unfortunately I get another error later on that the compiler can't find
some C files...

I attach the error.

Best regards,
Martin

[...]
creating build/temp.linux-x86_64-2.6/numpy/core/src/multiarray
compile options: '-Inumpy/core/include
- -Ibuild/src.linux-x86_64-2.6/numpy/core/include/numpy
- -I/usr/lib64/python2.6/site-packages/numpy/core/include
- -I/usr/include/python2.6 -Inumpy/core/src/private -Inumpy/core/src
- -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray
- -Inumpy/core/src/umath -Inumpy/core/include -c'
gcc: numpy/core/src/multiarray/multiarraymodule_onefile.c
numpy/core/src/multiarray/multiarraymodule_onefile.c:10:25: error:
scalartypes.c: No such file or directory
numpy/core/src/multiarray/multiarraymodule_onefile.c:14:24: error:
arraytypes.c: No such file or directory
In file included from
numpy/core/src/multiarray/multiarraymodule_onefile.c:35:
numpy/core/src/multiarray/conversion_utils.c: In function
'PyArray_PyIntAsInt':
numpy/core/src/multiarray/conversion_utils.c:378: error: 'INT_Descr'
undeclared (first use in this function)
numpy/core/src/multiarray/conversion_utils.c:378: error: (Each
undeclared identifier is reported only once
numpy/core/src/multiarray/conversion_utils.c:378: error: for each
function it appears in.)
numpy/core/src/multiarray/conversion_utils.c: In function
'PyArray_PyIntAsIntp':
numpy/core/src/multiarray/conversion_utils.c:467: error: 'LONG_Descr'
undeclared (first use in this function)
numpy/core/src/multiarray/multiarraymodule_onefile.c:38:20: error:
nditer.c: No such file or directory
numpy/core/src/multiarray/multiarraymodule_onefile.c:40:36: error:
lowlevel_strided_loops.c: No such file or directory
numpy/core/src/multiarray/multiarraymodule_onefile.c:42:20: error:
einsum.c: No such file or directory
numpy/core/src/multiarray/multiarraymodule_onefile.c:10:25: error:
scalartypes.c: No such file or directory
numpy/core/src/multiarray/multiarraymodule_onefile.c:14:24: error:
arraytypes.c: No such file or directory
In file included from
numpy/core/src/multiarray/multiarraymodule_onefile.c:35:
numpy/core/src/multiarray/conversion_utils.c: In function
'PyArray_PyIntAsInt':
numpy/core/src/multiarray/conversion_utils.c:378: error: 'INT_Descr'
undeclared (first use in this function)
numpy/core/src/multiarray/conversion_utils.c:378: error: (Each
undeclared identifier is reported only once
numpy/core/src/multiarray/conversion_utils.c:378: error: for each
function it appears in.)
numpy/core/src/multiarray/conversion_utils.c: In function
'PyArray_PyIntAsIntp':
numpy/core/src/multiarray/conversion_utils.c:467: error: 'LONG_Descr'
undeclared (first use in this function)
numpy/core/src/multiarray/multiarraymodule_onefile.c:38:20: error:
nditer.c: No such file or directory
numpy/core/src/multiarray/multiarraymodule_onefile.c:40:36: error:
lowlevel_strided_loops.c: No such file or directory
numpy/core/src/multiarray/multiarraymodule_onefile.c:42:20: error:
einsum.c: No such file or directory
error: Command "gcc -pthread -fno-strict-aliasing -O2 -g -pipe -Wall
- -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
- --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC
- -fwrapv -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
- -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic
- -D_GNU_SOURCE -fPIC -fwrapv -fPIC -Inumpy/core/include
- -Ibuild/src.linux-x86_64-2.6/numpy/core/include/numpy
- -I/usr/lib64/python2.6/site-packages/numpy/core/include
- -I/usr/include/python2.6 -Inumpy/core/src/private -Inumpy/core/src
- -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray
- -Inumpy/core/src/umath -Inumpy/core/include -c
numpy/core/src/multiarray/multiarraymodule_onefile.c -o
build/temp.linux-x86_64-2.6/numpy/core/src/multiarray/multiarraymodule_onefile.o"
failed with exit status 1
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