[Numpy-tickets] [NumPy] #363: failure to install numpy

NumPy numpy-tickets at scipy.net
Mon Oct 23 17:02:17 CDT 2006


#363: failure to install numpy
----------------------+-----------------------------------------------------
 Reporter:  mbennun   |       Owner:  somebody
     Type:  defect    |      Status:  new     
 Priority:  highest   |   Milestone:          
Component:  Other     |     Version:          
 Severity:  critical  |    Keywords:          
----------------------+-----------------------------------------------------
 Hello:

 We have tried to install numpy and failed.
 We have python2.4 and were able to successfully install f2py and
 scipy_distutils.
 The output of the 'python setup.py install' command is attached below.

 Thank you for your help.
 -Michal Ben-Nun

 Running from numpy source directory.
 F2PY Version 2_3364
 blas_opt_info:
 blas_mkl_info:
   libraries mkl,vml,guide not found in
 /usr1/mbennun/work/NSFCyber/python_intel/lib
   libraries mkl,vml,guide not found in /usr/local/lib
   libraries mkl,vml,guide not found in /usr/lib
   NOT AVAILABLE

 atlas_blas_threads_info:
 Setting PTATLAS=ATLAS
   libraries lapack,blas not found in
 /usr1/mbennun/work/NSFCyber/python_intel/lib
 Setting PTATLAS=ATLAS
 Setting PTATLAS=ATLAS
   FOUND:
     libraries = ['lapack', 'blas']
     library_dirs = ['/usr/local/lib']
     language = c
     include_dirs = ['/usr/local/include/atlas']

 Could not locate executable f95
 customize GnuFCompiler
 customize GnuFCompiler
 customize GnuFCompiler using config
 compiling '_configtest.c':

 /* This file is generated from numpy_distutils/system_info.py */
 void ATL_buildinfo(void);
 int main(void) {
   ATL_buildinfo();
   return 0;
 }
 C compiler: gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O3 -Wall
 -Wstrict-prototypes -fPIC

 compile options: '-c'
 gcc: _configtest.c
 /tmp/ccSQrFKJ.s: Assembler messages:
 /tmp/ccSQrFKJ.s:20: Error: suffix or operands invalid for `push'
 /tmp/ccSQrFKJ.s:22: Error: suffix or operands invalid for `push'
 /tmp/ccSQrFKJ.s:22: Error: suffix or operands invalid for `push'
 /tmp/ccSQrFKJ.s:31: Internal error, aborting at ../../gas/config/tc-i386.c
 line 3501 in output_imm
 Please report this bug.
 /tmp/ccSQrFKJ.s: Assembler messages:
 /tmp/ccSQrFKJ.s:20: Error: suffix or operands invalid for `push'
 /tmp/ccSQrFKJ.s:22: Error: suffix or operands invalid for `push'
 /tmp/ccSQrFKJ.s:31: Internal error, aborting at ../../gas/config/tc-i386.c
 line 3501 in output_imm
 Please report this bug.
 failure.
 removing: _configtest.c _configtest.o
 Status: 255
 Output:
   FOUND:
     libraries = ['lapack', 'blas']
     library_dirs = ['/usr/local/lib']
     language = c
     define_macros = [('NO_ATLAS_INFO', 2)]
     include_dirs = ['/usr/local/include/atlas']

 lapack_opt_info:
 lapack_mkl_info:
 mkl_info:
   libraries mkl,vml,guide not found in
 /usr1/mbennun/work/NSFCyber/python_intel/lib
   libraries mkl,vml,guide not found in /usr/local/lib
   libraries mkl,vml,guide not found in /usr/lib
   NOT AVAILABLE

   NOT AVAILABLE

 atlas_threads_info:
 Setting PTATLAS=ATLAS
   libraries lapack,blas not found in
 /usr1/mbennun/work/NSFCyber/python_intel/lib
   libraries lapack_atlas not found in
 /usr1/mbennun/work/NSFCyber/python_intel/lib
   libraries lapack_atlas not found in /usr/local/lib
 numpy.distutils.system_info.atlas_threads_info
 Setting PTATLAS=ATLAS
 /usr1/mbennun/work/NSFCyber/numpy-1.0rc3/numpy/distutils/system_info.py:934:
 UserWarning:
 *********************************************************************
     Lapack library (from ATLAS) is probably incomplete:
       size of /usr/local/lib/liblapack.a is 3887k (expected >4000k)

     Follow the instructions in the KNOWN PROBLEMS section of the file
     numpy/INSTALL.txt.
 *********************************************************************

   warnings.warn(message)
 Setting PTATLAS=ATLAS
   FOUND:
     libraries = ['lapack', 'lapack', 'blas']
     library_dirs = ['/usr/local/lib']
     language = c
     include_dirs = ['/usr/local/include/atlas']

 customize GnuFCompiler
 customize GnuFCompiler
 customize GnuFCompiler using config
 compiling '_configtest.c':

 /* This file is generated from numpy_distutils/system_info.py */
 void ATL_buildinfo(void);
 int main(void) {
   ATL_buildinfo();
   return 0;
 }
 C compiler: gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O3 -Wall
 -Wstrict-prototypes -fPIC

 compile options: '-c'
 gcc: _configtest.c
 /tmp/ccYe889d.s: Assembler messages:
 /tmp/ccYe889d.s:20: Error: suffix or operands invalid for `push'
 /tmp/ccYe889d.s:22: Error: suffix or operands invalid for `push'
 /tmp/ccYe889d.s:31: Internal error, aborting at ../../gas/config/tc-i386.c
 line 3501 in output_imm
 Please report this bug.
 /tmp/ccYe889d.s: Assembler messages:
 /tmp/ccYe889d.s:20: Error: suffix or operands invalid for `push'
 /tmp/ccYe889d.s:22: Error: suffix or operands invalid for `push'
 /tmp/ccYe889d.s:31: Internal error, aborting at ../../gas/config/tc-i386.c
 line 3501 in output_imm
 Please report this bug.
 failure.
 removing: _configtest.c _configtest.o
 Status: 255
 Output:
   FOUND:
     libraries = ['lapack', 'lapack', 'blas']
     library_dirs = ['/usr/local/lib']
     language = c
     define_macros = [('NO_ATLAS_INFO', 2)]
     include_dirs = ['/usr/local/include/atlas']

 running install
 running build
 running config_fc
 running build_src
 building py_modules sources
 building extension "numpy.core.multiarray" sources
 Generating build/src.linux-x86_64-2.4/numpy/core/config.h
 customize GnuFCompiler
 customize GnuFCompiler
 customize GnuFCompiler using config
 C compiler: gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O3 -Wall
 -Wstrict-prototypes -fPIC

 compile options:
 '-I/usr1/mbennun/work/NSFCyber/python_intel/include/python2.4
 -Inumpy/core/src -Inum
 py/core/include
 -I/usr1/mbennun/work/NSFCyber/python_intel/include/python2.4 -c'
 gcc: _configtest.c
 /tmp/ccaSumWn.s: Assembler messages:
 /tmp/ccaSumWn.s:59: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:61: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:65: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:67: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:70: Internal error, aborting at ../../gas/config/tc-i386.c
 line 3501 in output_imm
 Please report this bug.
 /tmp/ccaSumWn.s: Assembler messages:
 /tmp/ccaSumWn.s:59: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:61: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:65: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:67: Error: suffix or operands invalid for `push'
 /tmp/ccaSumWn.s:70: Internal error, aborting at ../../gas/config/tc-i386.c
 line 3501 in output_imm
 Please report this bug.
 failure.
 removing: _configtest.c _configtest.o
 Traceback (most recent call last):
   File "setup.py", line 89, in ?
     setup_package()
   File "setup.py", line 82, in setup_package
     configuration=configuration )
   File "/usr1/mbennun/work/NSFCyber/numpy-1.0rc3/numpy/distutils/core.py",
 line 174, in setup
     return old_setup(**new_attr)
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/core.py",
 line 149, in setup
     dist.run_commands()
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/dist.py",
 line 946, in run_c
 ommands
     self.run_command(cmd)
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/dist.py",
 line 966, in run_c
 ommand
     cmd_obj.run()
   File
 "/usr1/mbennun/work/NSFCyber/numpy-1.0rc3/numpy/distutils/command/install.py",
 line 16, in run
     r = old_install.run(self)
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/command/install.py",
 line 50
 6, in run
     self.run_command('build')
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/cmd.py",
 line 333, in run_co
 mmand
     self.distribution.run_command(command)
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/dist.py",
 line 966, in run_c
 ommand
     cmd_obj.run()
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/command/build.py",
 line 112,
  in run
     self.run_command(cmd_name)
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/cmd.py",
 line 333, in run_co
 mmand
     self.distribution.run_command(command)
   File
 "/usr1/mbennun/work/NSFCyber/python_intel/lib/python2.4/distutils/dist.py",
 line 966, in run_c
 ommand
     cmd_obj.run()
   File
 "/usr1/mbennun/work/NSFCyber/numpy-1.0rc3/numpy/distutils/command/build_src.py",
 line 87, in r
 un
     self.build_sources()
   File
 "/usr1/mbennun/work/NSFCyber/numpy-1.0rc3/numpy/distutils/command/build_src.py",
 line 106, in
 build_sources
     self.build_extension_sources(ext)
   File
 "/usr1/mbennun/work/NSFCyber/numpy-1.0rc3/numpy/distutils/command/build_src.py",
 line 212, in
 build_extension_sources
     sources = self.generate_sources(sources, ext)
   File
 "/usr1/mbennun/work/NSFCyber/numpy-1.0rc3/numpy/distutils/command/build_src.py",
 line 270, in
 generate_sources
     source = func(extension, build_dir)
   File "numpy/core/setup.py", line 50, in generate_config_h
     raise "ERROR: Failed to test configuration"
 ERROR: Failed to test configuration

-- 
Ticket URL: <http://projects.scipy.org/scipy/numpy/ticket/363>
NumPy <http://projects.scipy.org/scipy/numpy>
The fundamental package needed for scientific computing with Python.


More information about the Numpy-tickets mailing list