[SciPy-dev] Now new svn of numpy is ready
Christopher Fonnesbeck
chris at trichech.us
Thu Jan 5 07:50:03 CST 2006
On Jan 5, 2006, at 6:53 AM, Pearu Peterson wrote:
> test(10)
This runs pretty far on OSX, but ending with 16 errors from fftpack:
****************************************************************
WARNING: cblas module is empty
-----------
See scipy/INSTALL.txt for troubleshooting.
Notes:
* If atlas library is not found by numpy/distutils/system_info.py,
then scipy uses fblas instead of cblas.
****************************************************************
....................
======================================================================
FAIL: bench_random
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_diff)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 210, in bench_random
assert_array_almost_equal(diff(f,1),direct_diff(f,1))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 96.0%):
Array 1: [ 4.0000000e+00 4.4583823e+00 4.6585202e+00
4.5314873e+00
4.0154475e+00 3.0782890e+00 1.7457348e+00 1.22...
Array 2: [ 4.0000000e+00 3.9029585e+00 3.6083502e+00
3.1083616e+00
2.3987172e+00 1.4909128e+00 4.2567472e-01 -7.18...
======================================================================
FAIL: check_definition
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_diff)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 86, in check_definition
assert_array_almost_equal(diff(sin(x),2),direct_diff(sin(x),2))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 87.5%):
Array 1: [ -6.3519652e-15 -3.8268343e-01 -7.0710678e-01
-9.2387953e-01
-1.0000000e+00 -9.2387953e-01 -7.0710678e-01 -3.82...
Array 2: [ -7.3854931e-15 6.5259351e-15 -2.4942634e-15
-7.5636114e-17
1.4745663e-15 -1.9133685e-15 2.2804788e-16 8.70...
======================================================================
FAIL: bench_random
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_hilbert)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 356, in bench_random
assert_array_almost_equal(hilbert(f),direct_hilbert(f))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 96.0%):
Array 1: [ -1.0865211e+00 -1.1538025e+00 -1.1519434e+00
-1.0725580e+00
-9.1204050e-01 -6.7405401e-01 -3.7184092e-01 -2.91...
Array 2: [ -1.0865211e+00 +0.0000000e+00j -1.0575653e+00
-5.3966502e-17j
-9.7152085e-01 -3.8615213e-17j -8.3113061e-01 -1.544...
======================================================================
FAIL: check_random_even
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_hilbert)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 332, in check_random_even
assert_array_almost_equal(direct_hilbert(direct_ihilbert(f)),f)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 100.0%):
Array 1: [ -4.3368087e-19+0.j 0.0000000e+00-0.j
-4.0066888e-19-0.j
0.0000000e+00-0.j -3.0665868e-19-0.j 0.0000000e+00-0....
Array 2: [-0.3138695 -0.320617 -0.0202909 0.0488052
-0.373401 -0.1621773
-0.2607906 -0.1146876 -0.12861 0.3907841 0.09393...
======================================================================
FAIL: bench_random
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_shift)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 424, in bench_random
assert_array_almost_equal(direct_shift(f,1),sf)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 98.0%):
Array 1: [ 0.6015407 0.6432035 0.7632704 0.947396
1.1731603 1.4125187
1.635358 1.8137685 1.9262065 1.9605388 1.91521...
Array 2: [ 0.6015407 0.5654719 0.6040595 0.7013589
0.8369433 0.9885575
1.1344713 1.2554716 1.336468 1.3676865 1.34542...
======================================================================
FAIL: check_definition
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_shift)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 390, in check_definition
assert_array_almost_equal(shift(sin(x),a),direct_shift(sin(x),a))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 88.8888888889%):
Array 1: [ 0.0998334 0.4341242 0.7160532 0.9116156
0.9972237 0.9625519
0.8117822 0.5630995 0.2464987 -0.0998334 -0.43412...
Array 2: [ 0.0998334 0.0938127 0.0764768 0.0499167
0.0173359 -0.0173359
-0.0499167 -0.0764768 -0.0938127 -0.0998334 -0.09381...
======================================================================
FAIL: bench_random
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_tilbert)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 273, in bench_random
assert_array_almost_equal(tilbert(f,1),direct_tilbert(f,1))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 96.0%):
Array 1: [ -1.0896991e+00 -1.1569240e+00 -1.1548950e+00
-1.0752326e+00
-9.1434140e-01 -6.7589846e-01 -3.7316325e-01 -2.99...
Array 2: [ -1.0896991e+00 +0.0000000e+00j -1.0606855e+00
-6.1149403e-17j
-9.7447017e-01 -6.0785235e-17j -8.3380221e-01 +1.609...
======================================================================
FAIL: check_random_even
(scipy.fftpack.pseudo_diffs.test_pseudo_diffs.test_tilbert)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py",
line 240, in check_random_even
assert_array_almost_equal(direct_tilbert(direct_itilbert(f,h),h),f)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 100.0%):
Array 1: [ -1.5935877e-17+0.j -6.5549159e-18-0.j
-6.0983963e-18-0.j
1.5380005e-18-0.j 1.1268367e-17-0.j 7.7320506e-18-0....
Array 2: [-0.4516442 -0.4788809 0.260043 -0.1347756
-0.2030805 0.1716475
-0.4098054 0.0137122 0.4516803 -0.2769733 -0.27983...
======================================================================
FAIL: bench_random (scipy.fftpack.basic.test_basic.test_fft)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 162,
in bench_random
assert_array_almost_equal(fft(x),y)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 100.0%):
Array 1: [ 5.1042851e+01+0.j 3.3063755e+00+1.7852228j
-6.7669114e-01+2.3293438j -1.2238892e+00+1.0355247j
9.51554...
Array 2: [ 5.1042851e+01 +4.5495051e+01j 4.3657884e-01
+2.1522035e+00j
1.9258532e+00 +5.7806139e-01j -1.3614140e+00 -3.418...
======================================================================
FAIL: check_definition (scipy.fftpack.basic.test_basic.test_fft)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 98,
in check_definition
assert_array_almost_equal(y,y1)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 100.0%):
Array 1: [ 20.+0.j 0.+0.j -4.+4.j 0.+0.j -4.+0.j
0.-0.j -4.-4.j 0.-0.j]
Array 2: [ 20. +3.j -0.7071068+0.7071068j
-7. +4.j
-0.7071068-0.7071068j -4. -3.j 0.707106...
======================================================================
FAIL: check_definition (scipy.fftpack.basic.test_basic.test_fftn)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 425,
in check_definition
assert_array_almost_equal(y,direct_dftn(x))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 22.2222222222%):
Array 1: [[ 45. +0.j -4.5+2.5980762j -4.5-2.5980762j]
[-13.5+7.7942286j 0. +0.j 0. +0.j ]
[-13.5-7.79...
Array 2: [[ 45. +0.j -4.5+2.5980762j -4.5-2.5980762j]
[-13.5+0.j 0. +0.j 0. -0.j ]
[-13.5+0.j ...
======================================================================
FAIL: bench_random (scipy.fftpack.basic.test_basic.test_ifft)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 250,
in bench_random
assert_array_almost_equal(ifft(x),y)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 100.0%):
Array 1: [ 0.5398477 +0.0000000e+00j -0.0113129 +1.7200661e-02j
0.0226073 -1.0733876e-02j -0.0069369 -9.2497604e-03j
-0.033912...
Array 2: [ 5.3984769e-01 +5.2528836e-01j -1.8824526e-02
+2.8057247e-02j
2.7252891e-02 -1.4375254e-02j -2.9920605e-02 +1.643...
======================================================================
FAIL: check_definition (scipy.fftpack.basic.test_basic.test_ifft)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 183,
in check_definition
assert_array_almost_equal(y,y1)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 100.0%):
Array 1: [ 2.5+0.j 0. -0.j -0.5-0.5j 0. -0.j -0.5+0.j
0. +0.j -0.5+0.5j
0. +0.j ]
Array 2: [ 2.5 +0.375j 0.0883883+0.0883883j
-0.125 -0.5j
0.0883883-0.0883883j -0.5 -0.375j -0.0883883-0.0...
======================================================================
FAIL: check_random_real (scipy.fftpack.basic.test_basic.test_ifft)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 217,
in check_random_real
assert_array_almost_equal (ifft(fft(x)),x)
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 98.0392156863%):
Array 1: [ 0.0599215 +0.0000000e+00j 0.4412427 -1.5238355e-17j
0.7672772 +8.2722500e-17j 0.3091665 -1.2772878e-17j
0.562163...
Array 2: [ 0.0599215 0.8014683 0.9653611 0.3622346
0.22084 0.2799468
0.3725071 0.5772085 0.8525039 0.8912614 0.53216...
======================================================================
FAIL: check_definition (scipy.fftpack.basic.test_basic.test_ifftn)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 594,
in check_definition
assert_array_almost_equal(y,direct_idftn(x))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 22.2222222222%):
Array 1: [[ 5. +0.j -0.5-0.2886751j -0.5+0.2886751j]
[-1.5-0.8660254j 0. +0.j 0. +0.j ]
[-1.5+0.8660254j ...
Array 2: [[ 5. +0.j -0.5-0.2886751j -0.5+0.2886751j]
[-1.5+0.j 0. -0.j 0. +0.j ]
[-1.5+0.j ...
======================================================================
FAIL: check_definition (scipy.fftpack.basic.test_basic.test_irfft)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/scipy/fftpack/tests/test_basic.py", line 341,
in check_definition
assert_array_almost_equal(y,ifft(x1))
File "/Library/Frameworks/Python.framework/Versions/2.4/lib/
python2.4/site-packages/numpy/testing/utils.py", line 182, in
assert_array_almost_equal
assert cond,\
AssertionError:
Arrays are not almost equal (mismatch 50.0%):
Array 1: [ 2.625 -1.6856602 -0.375 -1.1856602
0.625 0.4356602 -0.375
0.9356602]
Array 2: [ 2.625+0.j -0.375-0.j -0.375-0.j -0.375-0.j 0.625
+0.j -0.375+0.j
-0.375+0.j -0.375+0.j]
----------------------------------------------------------------------
Ran 945 tests in 60.079s
FAILED (failures=16)
--
Christopher J. Fonnesbeck
Population Ecologist, Marine Mammal Section
Fish & Wildlife Research Institute (FWC)
St. Petersburg, FL
Adjunct Assistant Professor
Warnell School of Forest Resources
University of Georgia
Athens, GA
T: 727.235.5570
E: chris at trichech.us
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