[SciPy-dev] scipy and lapack

Karol Langner karol.langner at kn.pl
Tue Oct 10 02:24:57 CDT 2006


I installed scipy revision 2242 with manually built atlas, lapack, umfpack, 
fftw, and dbjfft libraries. The install looks fine, and the tests only give 
error that are labelled as "not real problems".

The install and test output can be found here:
http://www.mml.ch.pwr.wroc.pl/langner/tmp/scipy/

However,  when I import from scipy I get an ImportError:

>>> from scipy import *
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/cluster/__init__.      
py", line 9, in <module>
    import vq
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/cluster/vq.py", 
l      ine 21, in <module>
    from scipy.stats import std, mean
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/stats/__init__.py      
", line 7, in <module>
    from stats import *
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/stats/stats.py",       
line 190, in <module>
    import scipy.special as special
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/special/__init__.      
py", line 10, in <module>
    import orthogonal
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/special/orthogona      
l.py", line 65, in <module>
    from scipy.linalg import eig
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/linalg/__init__.p      
y", line 8, in <module>
    from basic import *
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/linalg/basic.py",       
line 17, in <module>
    from lapack import get_lapack_funcs
  File 
"/home/langner/apps/python/lib/python2.5/site-packages/scipy/linalg/lapack.py"      , 
line 18, in <module>
    from scipy.linalg import clapack
ImportError: /home/langner/apps/python/lib/python2.5/site-packages/scipy/linalg/clapa      
ck.so: undefined symbol: clapack_sgesv

Any suggestions?
Karol

-- 
written by Karol Langner
Tue Oct 10 09:05:30 CEST 2006


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