[SciPy-dev] scipy svn 2186 test() failure

Nicolas Limare nicolist at limare.net
Mon Sep 4 07:40:36 CDT 2006


built on numpy svn3107.
python 2.4.3, gcc 4.0.3, ubuntu dapper 6.06
linux 2.6.15-26-686 SMP i686

In [3]: import scipy
Overwriting info=<function info at 0xb661009c> from scipy.misc (was
<function info at 0xb72df374> from numpy.lib.utils)
In [4]: scipy.test()
Overwriting fft=<function fft at 0xb646fd84> from scipy.fftpack.basic
(was <module 'numpy.fft' from
'/usr/lib/python2.4/site-packages/numpy/fft/__init__.pyc'> from
/usr/lib/python2.4/site-packages/numpy/fft/__init__.pyc)
  Found 4 tests for scipy.linsolve.umfpack.umfpack
  Found 4 tests for scipy.io.array_import
  Found 128 tests for scipy.linalg.fblas
  Found 397 tests for scipy.ndimage
  Found 10 tests for scipy.integrate.quadpack
  Found 97 tests for scipy.stats.stats
  Found 47 tests for scipy.linalg.decomp
  Found 2 tests for scipy.integrate.quadrature
  Found 95 tests for scipy.sparse.sparse
  Found 20 tests for scipy.fftpack.pseudo_diffs
  Found 6 tests for scipy.optimize.optimize
  Found 5 tests for scipy.interpolate.fitpack
  Found 1 tests for scipy.interpolate
  Found 70 tests for scipy.stats.distributions
  Found 12 tests for scipy.io.mmio
  Found 10 tests for scipy.stats.morestats
  Found 4 tests for scipy.linalg.lapack
  Found 18 tests for scipy.fftpack.basic
  Found 4 tests for scipy.optimize.zeros
  Found 17 tests for scipy.io.mio
  Found 4 tests for scipy.fftpack.helper
  Found 41 tests for scipy.linalg.basic
  Found 2 tests for scipy.maxentropy.maxentropy
  Found 358 tests for scipy.special.basic
  Found 128 tests for scipy.lib.blas.fblas
  Found 7 tests for scipy.linalg.matfuncs
  Found 42 tests for scipy.lib.lapack
  Found 1 tests for scipy.optimize.cobyla
  Found 16 tests for scipy.lib.blas
  Found 1 tests for scipy.integrate
  Found 14 tests for scipy.linalg.blas
  Found 4 tests for scipy.signal.signaltools
  Found 0 tests for __main__
data-ftype: z compared to data D
Calling _superlu.zgssv
Use minimum degree ordering on A'+A.
.data-ftype: c compared to data F
Calling _superlu.cgssv
Use minimum degree ordering on A'+A.
.data-ftype: d compared to data d
Calling _superlu.dgssv
Use minimum degree ordering on A'+A.
.data-ftype: s compared to data f
Calling _superlu.sgssv
Use minimum degree ordering on A'+A.
.
Don't worry about a warning regarding the number of bytes read.
Warning: 1000000 bytes requested, 20 bytes read.
.......caxpy:n=4
..caxpy:n=3
....ccopy:n=4
..ccopy:n=3
.............cscal:n=4
....cswap:n=4
..cswap:n=3
.....daxpy:n=4
..daxpy:n=3
....dcopy:n=4
..dcopy:n=3
.............dscal:n=4
....dswap:n=4
..dswap:n=3
.....saxpy:n=4
..saxpy:n=3
....scopy:n=4
..scopy:n=3
.............sscal:n=4
....sswap:n=4
..sswap:n=3
.....zaxpy:n=4
..zaxpy:n=3
....zcopy:n=4
..zcopy:n=3
.............zscal:n=4
....zswap:n=4
..zswap:n=3
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................Took
13 points.
..........Resizing... 16 17 24
Resizing... 20 7 35
Resizing... 23 7 47
Resizing... 24 25 58
Resizing... 28 7 68
Resizing... 28 27 73
.....Use minimum degree ordering on A'+A.
........................Use minimum degree ordering on A'+A.
...................Resizing... 16 17 24
Resizing... 20 7 35
Resizing... 23 7 47
Resizing... 24 25 58
Resizing... 28 7 68
Resizing... 28 27 73
.....Use minimum degree ordering on A'+A.
.................Resizing... 16 17 24
Resizing... 20 7 35
Resizing... 23 7 47
Resizing... 24 25 58
Resizing... 28 7 68
Resizing... 28 27 73
.....Use minimum degree ordering on A'+A.
....................................../usr/lib/python2.4/site-packages/scipy/interpolate/fitpack2.py:410:
UserWarning:
The coefficients of the spline returned have been computed as the
minimal norm least-squares solution of a (numerically) rank deficient
system (deficiency=7). If deficiency is large, the results may be
inaccurate. Deficiency may strongly depend on the value of eps.
  warnings.warn(message)
.........................................................................................FTies
preclude use of exact statistic.
..Ties preclude use of exact statistic.
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................caxpy:n=4
..caxpy:n=3
....ccopy:n=4
..ccopy:n=3
.............cscal:n=4
....cswap:n=4
..cswap:n=3
.....daxpy:n=4
..daxpy:n=3
....dcopy:n=4
..dcopy:n=3
.............dscal:n=4
....dswap:n=4
..dswap:n=3
.....saxpy:n=4
..saxpy:n=3
....scopy:n=4
..scopy:n=3
.............sscal:n=4
....sswap:n=4
..sswap:n=3
.....zaxpy:n=4
..zaxpy:n=3
....zcopy:n=4
..zcopy:n=3
.............zscal:n=4
....zswap:n=4
..zswap:n=3
...Result may be inaccurate, approximate err = 1.36217727555e-08
...Result may be inaccurate, approximate err = 1.30251255798e-10
..............................................................Residual:
1.05006950608e-07
...................
======================================================================
FAIL: check_normal (scipy.stats.tests.test_morestats.test_anderson)
----------------------------------------------------------------------
Traceback (most recent call last):
  File
"/usr/lib/python2.4/site-packages/scipy/stats/tests/test_morestats.py",
line 51, in check_normal
    assert_array_less(A, crit[-2:])
  File "/usr/lib/python2.4/site-packages/numpy/testing/utils.py", line
235, in assert_array_less
    header='Arrays are not less-ordered')
  File "/usr/lib/python2.4/site-packages/numpy/testing/utils.py", line
215, in assert_array_compare
    assert cond, msg
AssertionError:
Arrays are not less-ordered

(mismatch 50.0%)
 x: array(0.97993935779150831)
 y: array([ 0.858,  1.021])

----------------------------------------------------------------------
Ran 1569 tests in 3.014s

FAILED (failures=1)
Out[4]: <unittest.TextTestRunner object at 0xb5a9edac>
In [5]: scipy.version.version
Out[5]: '0.5.1.dev2186'






-- 
Nico



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