[SciPy-dev] New scipy.test() errors in trunk

Nils Wagner nwagner@iam.uni-stuttgart...
Fri Feb 19 10:41:48 CST 2010


======================================================================
ERROR: Regression test for #880: empty array for zi 
crashes.
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/tests/test_signaltools.py", 
line 458, in test_empty_zi
     y, zf = lfilter(b, a, x, zi=zi)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/signaltools.py", 
line 603, in lfilter
     return sigtools._linear_filter(b, a, x, axis, zi)
NotImplementedError: input type 'object' not supported


======================================================================
ERROR: test_rank1 
(test_signaltools.TestLinearFilterDecimal)
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/tests/test_signaltools.py", 
line 360, in test_rank1
     assert_array_almost_equal(lfilter(b, a, x), y_r)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/signaltools.py", 
line 601, in lfilter
     return sigtools._linear_filter(b, a, x, axis)
NotImplementedError: input type 'object' not supported


======================================================================
ERROR: test_rank2 
(test_signaltools.TestLinearFilterDecimal)
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/tests/test_signaltools.py", 
line 401, in test_rank2
     y = lfilter(b, a, x, axis = 0)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/signaltools.py", 
line 601, in lfilter
     return sigtools._linear_filter(b, a, x, axis)
NotImplementedError: input type 'object' not supported


======================================================================
ERROR: test_rank2_init_cond_a0 
(test_signaltools.TestLinearFilterDecimal)
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/tests/test_signaltools.py", 
line 435, in test_rank2_init_cond_a0
     y, zf = lfilter(b, a, x, axis = 0, zi = np.ones((1, 
3)))
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/signaltools.py", 
line 603, in lfilter
     return sigtools._linear_filter(b, a, x, axis, zi)
NotImplementedError: input type 'object' not supported


======================================================================
ERROR: test_rank2_init_cond_a1 
(test_signaltools.TestLinearFilterDecimal)
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/tests/test_signaltools.py", 
line 419, in test_rank2_init_cond_a1
     y, zf = lfilter(b, a, x, axis = 1, zi = np.ones((4, 
1)))
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/signaltools.py", 
line 603, in lfilter
     return sigtools._linear_filter(b, a, x, axis, zi)
NotImplementedError: input type 'object' not supported


======================================================================
ERROR: test_rank3 
(test_signaltools.TestLinearFilterDecimal)
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/tests/test_signaltools.py", 
line 447, in test_rank3
     y = lfilter(b, a, x)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/signal/signaltools.py", 
line 601, in lfilter
     return sigtools._linear_filter(b, a, x, axis)
NotImplementedError: input type 'object' not supported


======================================================================
ERROR: test_mpmath.test_hyp2f1_real_some
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/numpy/testing/decorators.py", 
line 146, in skipper_func
     return f(*args, **kwargs)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/special/tests/test_mpmath.py", 
line 117, in test_hyp2f1_real_some
     except (TypeError, mpmath.libhyper.NoConvergence):
AttributeError: 'module' object has no attribute 
'libhyper'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.bernoulli_gen 
object at 0x2636ad0>, (0.29999999999999999,), array([0, 0, 
0, ..., 1, 0, 0]), 0.01, 'bernoulli chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.binom_gen 
object at 0x26368d0>, (5, 0.40000000000000002), array([2, 
2, 2, ..., 4, 1, 3]), 0.01, 'binom chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.boltzmann_gen 
object at 0x26ec590>, (1.3999999999999999, 19), array([0, 
0, 0, ..., 2, 0, 0]), 0.01, 'boltzmann chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.dlaplace_gen 
object at 0x26eca50>, (0.80000000000000004,), array([ 0, 
 0,  0, ...,  4, -1,  0]), 0.01, 'dlaplace chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.geom_gen 
object at 0x2636dd0>, (0.5,), array([1, 1, 2, ..., 6, 1, 
2]), 0.01, 'geom chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.hypergeom_gen 
object at 0x2636f50>, (30, 12, 6), array([1, 1, 4, ..., 3, 
2, 2]), 0.01, 'hypergeom chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.hypergeom_gen 
object at 0x2636f50>, (21, 3, 12), array([2, 3, 2, ..., 2, 
2, 1]), 0.01, 'hypergeom chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.hypergeom_gen 
object at 0x2636f50>, (21, 18, 11), array([ 9,  8,  9, 
..., 10, 10, 10]), 0.01, 'hypergeom chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.logser_gen 
object at 0x26ec110>, (0.59999999999999998,), array([1, 1, 
1, ..., 1, 1, 4]), 0.01, 'logser chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.nbinom_gen 
object at 0x2636c50>, (5, 0.5), array([0, 2, 6, ..., 3, 3, 
3]), 0.01, 'nbinom chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.nbinom_gen 
object at 0x2636c50>, (0.40000000000000002, 
0.40000000000000002), array([0, 0, 0, ..., 0, 0, 0]), 
0.01, 'nbinom chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.planck_gen 
object at 0x26ec410>, (0.51000000000000001,), array([1, 1, 
1, ..., 7, 0, 2]), 0.01, 'planck chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.poisson_gen 
object at 0x26ec290>, (0.59999999999999998,), array([0, 0, 
0, ..., 1, 0, 0]), 0.01, 'poisson chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.randint_gen 
object at 0x26ec710>, (7, 31), array([27, 10, 15, ..., 16, 
 9, 17]), 0.01, 'randint chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.skellam_gen 
object at 0x26ecbd0>, (15, 8), array([ 4,  6, 10, ...,  5, 
14, 15]), 0.01, 'skellam chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
ERROR: 
test_discrete_basic.test_discrete_basic(<scipy.stats.distributions.zipf_gen 
object at 0x26ec8d0>, (4,), array([1, 1, 1, ..., 1, 1, 
1]), 0.01, 'zipf chisquare')
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/stats/tests/test_discrete_basic.py", 
line 252, in check_discrete_chisquare
     freq,hsupp = np.histogram(rvs,histsupp,new=True)
TypeError: histogram() got an unexpected keyword argument 
'new'

======================================================================
FAIL: test_lambertw.test_values
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/special/tests/test_lambertw.py", 
line 80, in test_values
     FuncData(w, data, (0,1), 2, rtol=1e-10, 
atol=1e-13).check()
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/special/tests/testutils.py", 
line 187, in check
     assert False, "\n".join(msg)
AssertionError:
Max |adiff|: 1.77636e-15
Max |rdiff|: 2.06237e-16
Bad results for the following points (in output 0):
(-0.40000000000000002+0.40000000000000002j) 
                             0j => 
                   (nan+nan*j) != 
(-0.10396515323290657+0.61899273315171632j)  (rdiff 
                           0.0)
(-0.44800000000000001+0.40000000000000002j) 
                             0j => 
                   (nan+nan*j) != 
(-0.11855133765652383+0.66570534313583418j)  (rdiff 
                           0.0)
(-0.44800000000000001-0.40000000000000002j) 
                             0j => 
                   (nan+nan*j) != 
(-0.11855133765652383-0.66570534313583418j)  (rdiff 
                           0.0)

======================================================================
FAIL: test_mpmath.test_hyp2f1_some_points_2
----------------------------------------------------------------------
Traceback (most recent call last):
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/nose-0.11.2.dev-py2.6.egg/nose/case.py", 
line 183, in runTest
     self.test(*self.arg)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/numpy/testing/decorators.py", 
line 146, in skipper_func
     return f(*args, **kwargs)
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/special/tests/test_mpmath.py", 
line 106, in test_hyp2f1_some_points_2
     FuncData(sc.hyp2f1, dataset, (0,1,2,3), 4, 
rtol=1e-10).check()
   File 
"/home/nwagner/local/lib64/python2.6/site-packages/scipy/special/tests/testutils.py", 
line 187, in check
     assert False, "\n".join(msg)
AssertionError:
Max |adiff|: 1.48367e-22
Max |rdiff|: 0.989172
Bad results for the following points (in output 0):
                          112.0 
             5.0999999999999996 
           -0.90000000000000002 
           -0.99999000000000005 => 
       -1.6241361047970947e-24 != 
        -1.499910195656332e-22  (rdiff 
           0.98917177768708742)

----------------------------------------------------------------------
Ran 4332 tests in 76.236s

FAILED (KNOWNFAIL=11, SKIP=17, errors=24, failures=2)
<nose.result.TextTestResult run=4332 errors=24 failures=2>


  


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