[SciPy-Dev] FAILED (KNOWNFAIL=11, SKIP=39, errors=6, failures=1), py27 64bit osx

Ralf Gommers ralf.gommers@googlemail....
Mon Jun 28 07:05:58 CDT 2010


On Mon, Jun 28, 2010 at 1:05 PM, Vincent Davis <vincent@vincentdavis.net>wrote:

> Not sure if these are know, I looked for the failure in the tickets
> but found only old ones.
>

They are all known. But the test_signaltools.TestMedFilt error should have
been fixed:
http://projects.scipy.org/scipy/ticket/1124
http://projects.scipy.org/scipy/ticket/1102
Are you running latest trunk?

Cheers,
Ralf


Vincent
>
> ERROR: test_decomp.test_lapack_misaligned(<function solve at
> 0x10253e140>, (array([[  1.734e-255,   8.189e-217,   4.025e-178,
> 1.903e-139,   9.344e-101,
>          4.422e-062,   2.169e-023,   1.028e+016,   5.035e+054,
> 2.388e+093],
>       [  1.169e+132,   5.549e+170,   2.713e+209,   1.290e+248,
> 6.299e+286,
>         -9.272e-292,  -4.524e-253,  -2.155e-214,  -1.050e-175,
>  -5.007e-137],
>       [ -2.438e-098,  -1.163e-059,  -5.659e-021,  -2.703e+018,
>  -1.314e+057,
>         -6.281e+095,  -3.049e+134,  -1.459e+173,  -7.078e+211,
>  -3.391e+250],
>       [ -1.643e+289,   3.524e-294,   1.734e-255,   8.189e-217,
> 4.025e-178,
>          1.903e-139,   9.344e-101,   4.422e-062,   2.169e-023,
> 1.028e+016],
>       [  5.035e+054,   2.388e+093,   1.169e+132,   5.549e+170,
> 2.713e+209,
>          1.290e+248,   6.299e+286,  -9.272e-292,  -4.524e-253,
>  -2.155e-214],
>       [ -1.050e-175,  -5.007e-137,  -2.438e-098,  -1.163e-059,
>  -5.659e-021,
>         -2.703e+018,  -1.314e+057,  -6.281e+095,  -3.049e+134,
>  -1.459e+173],
>       [ -7.078e+211,  -3.391e+250,  -1.643e+289,   3.524e-294,
> 1.734e-255,
>          8.189e-217,   4.025e-178,   1.903e-139,   9.344e-101,
> 4.422e-062],
>       [  2.169e-023,   1.028e+016,   5.035e+054,   2.388e+093,
> 1.169e+132,
>          5.549e+170,   2.713e+209,   1.290e+248,   6.299e+286,
>  -9.272e-292],
>       [ -4.524e-253,  -2.155e-214,  -1.050e-175,  -5.007e-137,
>  -2.438e-098,
>         -1.163e-059,  -5.659e-021,  -2.703e+018,  -1.314e+057,
>  -6.281e+095],
>       [ -3.049e+134,  -1.459e+173,  -7.078e+211,  -3.391e+250,
>  -1.643e+289,
>          3.524e-294,   1.734e-255,   8.189e-217,   4.025e-178,
> 1.903e-139]]), array([        NaN,         NaN,         NaN,
> NaN,         NaN,  -3.264e+62,
>         6.682e+23,   9.710e-15,  -1.988e-53,  -2.520e-94])),
> {'overwrite_a': True, 'overwrite_b': True})
> test_decomp.test_lapack_misaligned(<function solve at 0x10253e140>,
> (array([[  1.734e-255,   8.189e-217,   4.025e-178,   1.903e-139,
> 9.344e-101,
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/nose/case.py",
> line 186, in runTest
>    self.test(*self.arg)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/linalg/tests/test_decomp.py",
> line 1074, in check_lapack_misaligned
>    func(*a,**kwargs)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/linalg/basic.py",
> line 49, in solve
>    a1, b1 = map(asarray_chkfinite,(a,b))
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/lib/function_base.py",
> line 528, in asarray_chkfinite
>    "array must not contain infs or NaNs")
> ValueError: array must not contain infs or NaNs
>
> ======================================================================
> ERROR: test_none (test_signaltools.TestMedFilt)
> Ticket #1124.
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/signal/tests/test_signaltools.py",
> line 289, in test_none
>    signal.medfilt(None)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/signal/signaltools.py",
> line 317, in medfilt
>    return sigtools._order_filterND(volume,domain,order)
> ValueError: order_filterND not available for this type
>
> ======================================================================
> ERROR: test_complex_nonsymmetric_modes
> (test_arpack.TestEigenComplexNonSymmetric)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 267, in test_complex_nonsymmetric_modes
>    self.eval_evec(m,typ,k,which)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 248, in eval_evec
>    eval,evec=eigen(a,k,which=which)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/arpack.py",
> line 397, in eigen
>    params.iterate()
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/arpack.py",
> line 222, in iterate
>    raise RuntimeError("Error info=%d in arpack" % self.info)
> RuntimeError: Error info=-8 in arpack
>
> ======================================================================
> ERROR: test_nonsymmetric_modes (test_arpack.TestEigenNonSymmetric)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 204, in test_nonsymmetric_modes
>    self.eval_evec(m,typ,k,which)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 186, in eval_evec
>    eval,evec=eigen(a,k,which=which,**kwds)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/arpack.py",
> line 397, in eigen
>    params.iterate()
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/arpack.py",
> line 222, in iterate
>    raise RuntimeError("Error info=%d in arpack" % self.info)
> RuntimeError: Error info=-8 in arpack
>
> ======================================================================
> ERROR: test_starting_vector (test_arpack.TestEigenNonSymmetric)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 214, in test_starting_vector
>    self.eval_evec(self.symmetric[0],typ,k,which='LM',v0=v0)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 186, in eval_evec
>    eval,evec=eigen(a,k,which=which,**kwds)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/arpack.py",
> line 397, in eigen
>    params.iterate()
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/arpack.py",
> line 222, in iterate
>    raise RuntimeError("Error info=%d in arpack" % self.info)
> RuntimeError: Error info=-8 in arpack
>
> ======================================================================
> FAIL: test_complex_symmetric_modes (test_arpack.TestEigenComplexSymmetric)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 156, in test_complex_symmetric_modes
>    self.eval_evec(self.symmetric[0],typ,k,which)
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/sparse/linalg/eigen/arpack/tests/test_arpack.py",
> line 145, in eval_evec
>    assert_array_almost_equal(eval,exact_eval,decimal=_ndigits[typ])
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/testing/utils.py",
> line 774, in assert_array_almost_equal
>    header='Arrays are not almost equal')
>  File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/testing/utils.py",
> line 618, in assert_array_compare
>    raise AssertionError(msg)
> AssertionError:
> Arrays are not almost equal
>
> (mismatch 100.0%)
>  x: array([ 1.07188725 +6.23436023e-08j,  4.91291142
> -3.25412906e-08j], dtype=complex64)
>  y: array([ 5.+0.j,  6.+0.j], dtype=complex64)
> >>  raise AssertionError('\nArrays are not almost equal\n\n(mismatch
> 100.0%)\n x: array([ 1.07188725 +6.23436023e-08j,  4.91291142
> -3.25412906e-08j], dtype=complex64)\n y: array([ 5.+0.j,  6.+0.j],
> dtype=complex64)')
>
>
> ----------------------------------------------------------------------
> Ran 4608 tests in 177.171s
>
> FAILED (KNOWNFAIL=11, SKIP=39, errors=6, failures=1)
> <nose.result.TextTestResult run=4608 errors=6 failures=1>
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