[SciPy-Dev] Problems building SciPy-0.11.0b1 on CentOS

Doll, Margaret Ann margaret_doll@brown....
Fri Jul 27 12:48:55 CDT 2012


I have CentOS release 5.6 (Final)

I have defined the variables

ATLAS=/usr/local/lib/libsatlas.so:/usr/local/lib/libtatlas.so
BLAS=/usr/lib64/libblas.so
LAPACK=
FLAPACK=/usr/lib/liblapack.so.3


Executed the line to build and install

scipy-0.11.0b1]# python setup.py install

This ends with


 File "/usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py",
line 321, in get_info
    return cl().get_info(notfound_action)
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py",
line 472, in get_info
    raise self.notfounderror(self.notfounderror.__doc__)
numpy.distutils.system_info.LapackNotFoundError:
    Lapack (http://www.netlib.org/lapack/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [lapack]) or by setting
    the LAPACK environment variable.

I have also tried

LAPACK=/usr/lib/liblapack.so.3

How do I fix this problem?

Atlas was built with

./configure --shared --prefix=/share/apps
--with-netlib-lapack-tarfile=/share/apps/lapack-3.4.1.tgz
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