[Scipy-tickets] [SciPy] #790: Missed gfortran library when linking umfpack

SciPy scipy-tickets@scipy....
Tue Dec 2 10:28:36 CST 2008


#790: Missed gfortran library when linking umfpack
---------------------------------+------------------------------------------
 Reporter:  edlenz               |        Owner:  wnbell
     Type:  defect               |       Status:  new   
 Priority:  normal               |    Milestone:  0.7.0 
Component:  scipy.sparse.linalg  |      Version:        
 Severity:  blocker              |   Resolution:        
 Keywords:  umfpack              |  
---------------------------------+------------------------------------------
Comment (by edlenz):

 but, anyway, here is the config

 $ python setup.py config
 umfpack_info:
 amd_info:
   FOUND:
     libraries = ['amd']
     library_dirs = ['/usr/local/SuiteSparse/Lib']
     swig_opts = ['-I/usr/local/include']
     define_macros = [('SCIPY_AMD_H', None)]
     include_dirs = ['/usr/local/include']

   FOUND:
     libraries = ['umfpack', 'amd']
     library_dirs = ['/usr/local/SuiteSparse/Lib']
     swig_opts = ['-I/usr/local/include', '-I/usr/local/include']
     define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)]
     include_dirs = ['/usr/local/include']

 blas_opt_info:
 blas_mkl_info:
   libraries mkl,vml,guide not found in /usr/local/lib
   libraries mkl,vml,guide not found in /usr/lib
   NOT AVAILABLE

 atlas_blas_threads_info:
 Setting PTATLAS=ATLAS
 Setting PTATLAS=ATLAS
 Setting PTATLAS=ATLAS
   FOUND:
     libraries = ['ptf77blas', 'ptcblas', 'atlas']
     library_dirs = ['/usr/local/atlas/lib']
     language = c

 /usr/lib/python2.6/site-packages/numpy/distutils/command/config.py:239:
 DeprecationWarning:
 +++++++++++++++++++++++++++++++++++++++++++++++++
 Usage of get_output is deprecated: please do not
 use it anymore, and avoid configuration checks
 involving running executable on the target machine.
 +++++++++++++++++++++++++++++++++++++++++++++++++

   DeprecationWarning)
 customize GnuFCompiler
 Could not locate executable g77
 Could not locate executable f77
 customize IntelFCompiler
 Could not locate executable ifort
 Could not locate executable ifc
 customize LaheyFCompiler
 Could not locate executable lf95
 customize PGroupFCompiler
 Could not locate executable pgf90
 Could not locate executable pgf77
 customize AbsoftFCompiler
 Could not locate executable f90
 customize NAGFCompiler
 Could not locate executable f95
 customize VastFCompiler
 customize GnuFCompiler
 customize CompaqFCompiler
 Could not locate executable fort
 customize IntelItaniumFCompiler
 Could not locate executable efort
 Could not locate executable efc
 customize IntelEM64TFCompiler
 customize Gnu95FCompiler
 Found executable /usr/bin/gfortran
 customize Gnu95FCompiler
 customize Gnu95FCompiler using config
   FOUND:
     libraries = ['ptf77blas', 'ptcblas', 'atlas']
     library_dirs = ['/usr/local/atlas/lib']
     language = c
     define_macros = [('ATLAS_INFO', '"\\"?.?.?\\""')]

 running config

 but, as I told you, the build works fine and installs everything properly.

-- 
Ticket URL: <http://scipy.org/scipy/scipy/ticket/790#comment:3>
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