[SciPy-user] error building scipy on linux with mkl

WB cssmwbs at gmail.com
Fri Dec 15 02:22:38 CST 2006


uggh... please disregard.  not paying attention...
doesn't help to add a non-library path to the
LD_LIBRARY_PATH variable!  :|

On 12/14/06, WB <cssmwbs at gmail.com> wrote:
>
> hi,
> i am attempting to build scipy on a linux machine with mkl 9.0 installed.
> when i do
>
> python setup.py install
>
> i get lots of warnings, and then build failure with the following output:
>
> begin error out>>
>
> In file included from Lib/fftpack/src/drfft.c:7:
> Lib/fftpack/src/fftpack.h:44:22: error: mkl_dfti.h: No such file or
> directory
> In file included from Lib/fftpack/src/drfft.c:7:
> Lib/fftpack/src/fftpack.h:44:22: error: mkl_dfti.h: No such file or
> directory
> error: Command "gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -g -pipe
> -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
> --param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic
> -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fPIC -DSCIPY_MKL_H
> -DSCIPY_MKL_H -I/usr/local/include -I/usr/include -Ibuild/src.linux-
> i686-2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include
> -I/usr/include/python2.4 -c Lib/fftpack/src/drfft.c -o build/temp.linux-
> i686-2.4/Lib/fftpack/src/drfft.o" failed with exit status 1
>
> <<end error out
>
> so i checked to see if i had the file it is complaining about:
> [bryan at localhost ~]$ locate mkl_dfti.h
> /opt/intel/mkl/9.0/include/mkl_dfti.h
>
> and checked to see if that directory is on my LD_LIBRARY_PATH:
> [bryan at localhost ~]$ echo $LD_LIBRARY_PATH
>
> /opt/intel/mkl/9.0/lib/32:/opt/intel/cc/9.1.045/lib:/opt/intel/mkl/9.0/include
>
> anyone know what i am supposed to do to get this to work?
>
> thanks,
> bryan
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