[SciPy-user] Error in scipy.test(10) even after compiling successfully- Mac OS X 10.4.11 Apple GCC 4.0.1

Joshua Lippai discerptor@gmail....
Mon Dec 3 16:22:02 CST 2007


On Dec 3, 2007 2:03 AM, Joshua Lippai <discerptor@gmail.com> wrote:
>
> On Nov 29, 2007 5:58 PM, David Cournapeau <david@ar.media.kyoto-u.ac.jp> wrote:
> >
> > Joshua Lippai wrote:
> > > Hello all,
> > >
> > > After building scipy, I ran the scipy tests and got this error in check_integer:
> > >
> > > ======================================================================
> > > ERROR: check_integer (scipy.io.tests.test_array_import.TestReadArray)
> > > ----------------------------------------------------------------------
> > > Traceback (most recent call last):
> > >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests/test_array_import.py",
> > > line 55, in check_integer
> > >     from scipy import stats
> > >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/stats/__init__.py",
> > > line 7, in <module>
> > >     from stats import *
> > >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/stats/stats.py",
> > > line 191, in <module>
> > >     import scipy.special as special
> > >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/__init__.py",
> > > line 8, in <module>
> > >     from basic import *
> > >   File "/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/basic.py",
> > > line 8, in <module>
> > >     from _cephes import *
> > > ImportError: dlopen(/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/_cephes.so,
> > > 2): Symbol not found: __gfortran_pow_r8_i4
> > >   Referenced from:
> > > /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/special/_cephes.so
> > >   Expected in: dynamic lookup
> > >
> > > It would appear it's not finding a symbol for gfrotran in one of the
> > > files, and this in turn makes it impossible to import _cephes. How
> > > would I go about remedying this?
> > >
> > This symbol is in the gfortran runtime. We need the complete build log
> > to be sure about the exact problem, but I expect some mismatch between
> > fortran compilers (do you have several fortran compilers on your machine ?).
> >
> > cheers,
> >
> > David
> >
> > _______________________________________________
> > SciPy-user mailing list
> > SciPy-user@scipy.org
> > http://projects.scipy.org/mailman/listinfo/scipy-user
> >
>
> That sounds about right... looking at the build dialog, certain
> commands seem to want to use gnu95 while the others want gfortran.
>
> unifing config_fc, config, build_clib, build_ext, build commands
> --fcompiler options
>   commands have different --fcompiler options: ['gfortran', 'gnu95'],
> using first in list as default
>
> I tried setting the --fcompiler option for all of the commands
> mentioned there to gfortran (at least it changed the default from
> gnu95 to gfortran like I wanted), but it still gives that message.
> Anything else I can do to make this confusion for the compiler go
> away?
>
> Josh
>

Here's the full dialog for build and install, btw (and it seems to not
give me that message anymore, but the error still shows up in
scipy.test(1,10)):

Computer:~/python_sources/scipy Josh$ CC=/usr/bin/gcc CXX=/usr/bin/g++
python setup.py build_src config_fc --fcompiler=gfortran config
--fcompiler=gfortran build_clib --fcompiler=gfortran build_ext
--fcompiler=gfortran build --fcompiler=gfortran
mkl_info:
  libraries mkl,vml,guide not found in
/Library/Frameworks/Python.framework/Versions/2.5/lib
  libraries mkl,vml,guide not found in /usr/local/lib
  libraries mkl,vml,guide not found in /usr/lib
  NOT AVAILABLE

fftw3_info:
  libraries fftw3 not found in
/Library/Frameworks/Python.framework/Versions/2.5/lib
  FOUND:
    libraries = ['fftw3']
    library_dirs = ['/usr/local/lib']
    define_macros = [('SCIPY_FFTW3_H', None)]
    include_dirs = ['/usr/local/include']

djbfft_info:
  NOT AVAILABLE

blas_opt_info:
  FOUND:
    extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
    define_macros = [('NO_ATLAS_INFO', 3)]
    extra_compile_args = ['-faltivec',
'-I/System/Library/Frameworks/vecLib.framework/Headers']

lapack_opt_info:
  FOUND:
    extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
    define_macros = [('NO_ATLAS_INFO', 3)]
    extra_compile_args = ['-faltivec']

non-existing path in 'scipy/linsolve': 'tests'
umfpack_info:
  libraries umfpack not found in
/Library/Frameworks/Python.framework/Versions/2.5/lib
  libraries umfpack not found in /usr/local/lib
  libraries umfpack not found in /usr/lib
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/distutils/system_info.py:414:
UserWarning:
    UMFPACK sparse solver (http://www.cise.ufl.edu/research/sparse/umfpack/)
    not found. Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [umfpack]) or by setting
    the UMFPACK environment variable.
  warnings.warn(self.notfounderror.__doc__)
  NOT AVAILABLE

/Users/Josh/python_sources/scipy/scipy/__init__.py:18: UserWarning:
Module scipy was already imported from
/Users/Josh/python_sources/scipy/scipy/__init__.pyc, but
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages
is being added to sys.path
  import pkg_resources as _pr # activate namespace packages
(manipulates __path__)
running build_src
building py_modules sources
building library "dfftpack" sources
building library "linpack_lite" sources
building library "mach" sources
building library "quadpack" sources
building library "odepack" sources
building library "fitpack" sources
building library "superlu_src" sources
building library "odrpack" sources
building library "minpack" sources
building library "rootfind" sources
building library "c_misc" sources
building library "cephes" sources
building library "mach" sources
building library "toms" sources
building library "amos" sources
building library "cdf" sources
building library "specfun" sources
building library "statlib" sources
building extension "scipy.cluster._vq" sources
building extension "scipy.fftpack._fftpack" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.fftpack.convolve" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.integrate._quadpack" sources
building extension "scipy.integrate._odepack" sources
building extension "scipy.integrate.vode" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.interpolate._fitpack" sources
building extension "scipy.interpolate.dfitpack" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/interpolate/dfitpack-f2pywrappers.f'
to sources.
building extension "scipy.io.numpyio" sources
building extension "scipy.lib.blas.fblas" sources
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/build/src.macosx-10.4-ppc-2.5/scipy/lib/blas/fblas-f2pywrappers.f'
to sources.
building extension "scipy.lib.blas.cblas" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/lib/blas/cblas.pyf' to sources.
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.flapack" sources
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.clapack" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/lib/lapack/clapack.pyf'
to sources.
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.calc_lwork" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.atlas_version" sources
building extension "scipy.linalg.fblas" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/fblas.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/build/src.macosx-10.4-ppc-2.5/scipy/linalg/fblas-f2pywrappers.f'
to sources.
building extension "scipy.linalg.cblas" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/cblas.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg.flapack" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/flapack.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/build/src.macosx-10.4-ppc-2.5/scipy/linalg/flapack-f2pywrappers.f'
to sources.
building extension "scipy.linalg.clapack" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/clapack.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg._flinalg" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg.calc_lwork" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg.atlas_version" sources
building extension "scipy.linalg._iterative" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linsolve._zsuperlu" sources
building extension "scipy.linsolve._dsuperlu" sources
building extension "scipy.linsolve._csuperlu" sources
building extension "scipy.linsolve._ssuperlu" sources
building extension "scipy.linsolve.umfpack.__umfpack" sources
building extension "scipy.odr.__odrpack" sources
building extension "scipy.optimize._minpack" sources
building extension "scipy.optimize._zeros" sources
building extension "scipy.optimize._lbfgsb" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.optimize.moduleTNC" sources
building extension "scipy.optimize._cobyla" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.optimize.minpack2" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.signal.sigtools" sources
building extension "scipy.signal.spline" sources
building extension "scipy.sparse._sparsetools" sources
building extension "scipy.special._cephes" sources
building extension "scipy.special.specfun" sources
f2py options: ['--no-wrap-functions']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.stats.statlib" sources
f2py options: ['--no-wrap-functions']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.stats.futil" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.stats.mvn" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/stats/mvn-f2pywrappers.f'
to sources.
building extension "scipy.ndimage._nd_image" sources
building extension "scipy.ndimage.segment._segmenter" sources
building extension "scipy.stsci.convolve._correlate" sources
building extension "scipy.stsci.convolve._lineshape" sources
building extension "scipy.stsci.image._combine" sources
building data_files sources
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands
--fcompiler options
running config
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
customize Gnu95FCompiler
Found executable /usr/local/bin/gfortran
customize Gnu95FCompiler using build_clib
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
library 'mach' defined more than once, overwriting build_info
{'sources': ['scipy/integrate/mach/d1mach.f',
'scipy/integrate/mach/i1mach.f', 'scipy/integrate/mach/r1mach.f',
'scipy/integrate/mach/xerror.f'], 'config_fc': {'noopt':
('scipy/integrate/setup.pyc', 1)}, 'source_languages': ['f77']}...
with
{'sources': ['scipy/special/mach/d1mach.f',
'scipy/special/mach/i1mach.f', 'scipy/special/mach/r1mach.f',
'scipy/special/mach/xerror.f'], 'config_fc': {'noopt':
('scipy/special/setup.pyc', 1)}, 'source_languages': ['f77']}...
extending extension 'scipy.linsolve._zsuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.linsolve._dsuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.linsolve._csuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.linsolve._ssuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
customize UnixCCompiler
customize UnixCCompiler using build_ext
customize Gnu95FCompiler
customize Gnu95FCompiler using build_ext
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands
--compiler options
running build_py
copying scipy/__svn_version__.py -> build/lib.macosx-10.4-ppc-2.5/scipy
copying build/src.macosx-10.4-ppc-2.5/scipy/__config__.py ->
build/lib.macosx-10.4-ppc-2.5/scipy
copying scipy/io/mmio.py -> build/lib.macosx-10.4-ppc-2.5/scipy/io


Computer:~/python_sources/scipy Josh$ sudo python setup.py install
Password:
mkl_info:
  libraries mkl,vml,guide not found in
/Library/Frameworks/Python.framework/Versions/2.5/lib
  libraries mkl,vml,guide not found in /usr/local/lib
  libraries mkl,vml,guide not found in /usr/lib
  NOT AVAILABLE

fftw3_info:
  libraries fftw3 not found in
/Library/Frameworks/Python.framework/Versions/2.5/lib
  FOUND:
    libraries = ['fftw3']
    library_dirs = ['/usr/local/lib']
    define_macros = [('SCIPY_FFTW3_H', None)]
    include_dirs = ['/usr/local/include']

djbfft_info:
  NOT AVAILABLE

blas_opt_info:
  FOUND:
    extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
    define_macros = [('NO_ATLAS_INFO', 3)]
    extra_compile_args = ['-faltivec',
'-I/System/Library/Frameworks/vecLib.framework/Headers']

lapack_opt_info:
  FOUND:
    extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
    define_macros = [('NO_ATLAS_INFO', 3)]
    extra_compile_args = ['-faltivec']

non-existing path in 'scipy/linsolve': 'tests'
umfpack_info:
  libraries umfpack not found in
/Library/Frameworks/Python.framework/Versions/2.5/lib
  libraries umfpack not found in /usr/local/lib
  libraries umfpack not found in /usr/lib
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/distutils/system_info.py:414:
UserWarning:
    UMFPACK sparse solver (http://www.cise.ufl.edu/research/sparse/umfpack/)
    not found. Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [umfpack]) or by setting
    the UMFPACK environment variable.
  warnings.warn(self.notfounderror.__doc__)
  NOT AVAILABLE

/Users/Josh/python_sources/scipy/scipy/__init__.py:18: UserWarning:
Module scipy was already imported from
/Users/Josh/python_sources/scipy/scipy/__init__.pyc, but
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages
is being added to sys.path
  import pkg_resources as _pr # activate namespace packages
(manipulates __path__)
running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands
--compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands
--fcompiler options
running build_src
building py_modules sources
building library "dfftpack" sources
building library "linpack_lite" sources
building library "mach" sources
building library "quadpack" sources
building library "odepack" sources
building library "fitpack" sources
building library "superlu_src" sources
building library "odrpack" sources
building library "minpack" sources
building library "rootfind" sources
building library "c_misc" sources
building library "cephes" sources
building library "mach" sources
building library "toms" sources
building library "amos" sources
building library "cdf" sources
building library "specfun" sources
building library "statlib" sources
building extension "scipy.cluster._vq" sources
building extension "scipy.fftpack._fftpack" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.fftpack.convolve" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.integrate._quadpack" sources
building extension "scipy.integrate._odepack" sources
building extension "scipy.integrate.vode" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.interpolate._fitpack" sources
building extension "scipy.interpolate.dfitpack" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/interpolate/dfitpack-f2pywrappers.f'
to sources.
building extension "scipy.io.numpyio" sources
building extension "scipy.lib.blas.fblas" sources
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/build/src.macosx-10.4-ppc-2.5/scipy/lib/blas/fblas-f2pywrappers.f'
to sources.
building extension "scipy.lib.blas.cblas" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/lib/blas/cblas.pyf' to sources.
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.flapack" sources
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.clapack" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/lib/lapack/clapack.pyf'
to sources.
f2py options: ['skip:', ':']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.calc_lwork" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.lib.lapack.atlas_version" sources
building extension "scipy.linalg.fblas" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/fblas.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/build/src.macosx-10.4-ppc-2.5/scipy/linalg/fblas-f2pywrappers.f'
to sources.
building extension "scipy.linalg.cblas" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/cblas.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg.flapack" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/flapack.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/build/src.macosx-10.4-ppc-2.5/scipy/linalg/flapack-f2pywrappers.f'
to sources.
building extension "scipy.linalg.clapack" sources
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/linalg/clapack.pyf' to sources.
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg._flinalg" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg.calc_lwork" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linalg.atlas_version" sources
building extension "scipy.linalg._iterative" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.linsolve._zsuperlu" sources
building extension "scipy.linsolve._dsuperlu" sources
building extension "scipy.linsolve._csuperlu" sources
building extension "scipy.linsolve._ssuperlu" sources
building extension "scipy.linsolve.umfpack.__umfpack" sources
building extension "scipy.odr.__odrpack" sources
building extension "scipy.optimize._minpack" sources
building extension "scipy.optimize._zeros" sources
building extension "scipy.optimize._lbfgsb" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.optimize.moduleTNC" sources
building extension "scipy.optimize._cobyla" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.optimize.minpack2" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.signal.sigtools" sources
building extension "scipy.signal.spline" sources
building extension "scipy.sparse._sparsetools" sources
building extension "scipy.special._cephes" sources
building extension "scipy.special.specfun" sources
f2py options: ['--no-wrap-functions']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.stats.statlib" sources
f2py options: ['--no-wrap-functions']
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.stats.futil" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
building extension "scipy.stats.mvn" sources
f2py options: []
  adding 'build/src.macosx-10.4-ppc-2.5/fortranobject.c' to sources.
  adding 'build/src.macosx-10.4-ppc-2.5' to include_dirs.
  adding 'build/src.macosx-10.4-ppc-2.5/scipy/stats/mvn-f2pywrappers.f'
to sources.
building extension "scipy.ndimage._nd_image" sources
building extension "scipy.ndimage.segment._segmenter" sources
building extension "scipy.stsci.convolve._correlate" sources
building extension "scipy.stsci.convolve._lineshape" sources
building extension "scipy.stsci.image._combine" sources
building data_files sources
running build_py
copying scipy/__svn_version__.py -> build/lib.macosx-10.4-ppc-2.5/scipy
copying build/src.macosx-10.4-ppc-2.5/scipy/__config__.py ->
build/lib.macosx-10.4-ppc-2.5/scipy
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
customize NAGFCompiler
Could not locate executable f95
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize IBMFCompiler
Could not locate executable xlf90
Could not locate executable xlf
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize GnuFCompiler
Could not locate executable g77
customize Gnu95FCompiler
Found executable /usr/local/bin/gfortran
customize Gnu95FCompiler
customize Gnu95FCompiler using build_clib
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
library 'mach' defined more than once, overwriting build_info
{'sources': ['scipy/integrate/mach/d1mach.f',
'scipy/integrate/mach/i1mach.f', 'scipy/integrate/mach/r1mach.f',
'scipy/integrate/mach/xerror.f'], 'config_fc': {'noopt':
('scipy/integrate/setup.pyc', 1)}, 'source_languages': ['f77']}...
with
{'sources': ['scipy/special/mach/d1mach.f',
'scipy/special/mach/i1mach.f', 'scipy/special/mach/r1mach.f',
'scipy/special/mach/xerror.f'], 'config_fc': {'noopt':
('scipy/special/setup.pyc', 1)}, 'source_languages': ['f77']}...
extending extension 'scipy.linsolve._zsuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.linsolve._dsuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.linsolve._csuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.linsolve._ssuperlu' defined_macros with
[('USE_VENDOR_BLAS', 1)]
customize UnixCCompiler
customize UnixCCompiler using build_ext
customize NAGFCompiler
customize AbsoftFCompiler
customize IBMFCompiler
customize IntelFCompiler
customize GnuFCompiler
customize Gnu95FCompiler
customize Gnu95FCompiler
customize Gnu95FCompiler using build_ext
running install_lib
copying build/lib.macosx-10.4-ppc-2.5/scipy/__config__.py ->
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy
copying build/lib.macosx-10.4-ppc-2.5/scipy/__svn_version__.py ->
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy
copying build/lib.macosx-10.4-ppc-2.5/scipy/io/mmio.py ->
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io
byte-compiling /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/__config__.py
to __config__.pyc
byte-compiling /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/__svn_version__.py
to __svn_version__.pyc
byte-compiling /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/mmio.py
to mmio.pyc
running install_data
copying scipy/io/tests/test_mmio.py ->
/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy/io/tests/
running install_egg_info
Writing /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/scipy-0.7.0.dev3612-py2.5.egg-info


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