[SciPy-user] installation problems on SUSE 10.2

John Schulman joschu@caltech....
Fri Jun 26 09:00:08 CDT 2009


Thanks for the help. I removed g77, and I removed blas and lapack just
in case something went wrong the first time, and tried again. It looks
like the installer couldn't find some stuff.

Below, I included the results of install and test()


> sudo python setup.py install
root's password:
Warning: No configuration returned, assuming unavailable.
blas_opt_info:
blas_mkl_info:
  libraries mkl,vml,guide not found in /usr/local/lib64
  libraries mkl,vml,guide not found in /usr/local/lib
  libraries mkl,vml,guide not found in /usr/lib64
  libraries mkl,vml,guide not found in /usr/lib
  NOT AVAILABLE

atlas_blas_threads_info:
Setting PTATLAS=ATLAS
  libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64
  libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
  libraries ptf77blas,ptcblas,atlas not found in /usr/lib64
  libraries ptf77blas,ptcblas,atlas not found in /usr/lib
  NOT AVAILABLE

atlas_blas_info:
  libraries f77blas,cblas,atlas not found in /usr/local/lib64
  libraries f77blas,cblas,atlas not found in /usr/local/lib
  libraries f77blas,cblas,atlas not found in /usr/lib64
  libraries f77blas,cblas,atlas not found in /usr/lib
  NOT AVAILABLE

/usr/local/lib64/python2.5/site-packages/numpy/distutils/system_info.py:1388:
UserWarning:
    Atlas (http://math-atlas.sourceforge.net/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [atlas]) or by setting
    the ATLAS environment variable.
  warnings.warn(AtlasNotFoundError.__doc__)
blas_info:
  libraries blas not found in /usr/local/lib64
  libraries blas not found in /usr/local/lib
  FOUND:
    libraries = ['blas']
    library_dirs = ['/usr/lib64']
    language = f77

  FOUND:
    libraries = ['blas']
    library_dirs = ['/usr/lib64']
    define_macros = [('NO_ATLAS_INFO', 1)]
    language = f77

lapack_opt_info:
lapack_mkl_info:
mkl_info:
  libraries mkl,vml,guide not found in /usr/local/lib64
  libraries mkl,vml,guide not found in /usr/local/lib
  libraries mkl,vml,guide not found in /usr/lib64
  libraries mkl,vml,guide not found in /usr/lib
  NOT AVAILABLE

  NOT AVAILABLE

atlas_threads_info:
Setting PTATLAS=ATLAS
  libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64
  libraries lapack_atlas not found in /usr/local/lib64
  libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
  libraries lapack_atlas not found in /usr/local/lib
  libraries ptf77blas,ptcblas,atlas not found in /usr/lib64
  libraries lapack_atlas not found in /usr/lib64
  libraries ptf77blas,ptcblas,atlas not found in /usr/lib
  libraries lapack_atlas not found in /usr/lib
numpy.distutils.system_info.atlas_threads_info
  NOT AVAILABLE

atlas_info:
  libraries f77blas,cblas,atlas not found in /usr/local/lib64
  libraries lapack_atlas not found in /usr/local/lib64
  libraries f77blas,cblas,atlas not found in /usr/local/lib
  libraries lapack_atlas not found in /usr/local/lib
  libraries f77blas,cblas,atlas not found in /usr/lib64
  libraries lapack_atlas not found in /usr/lib64
  libraries f77blas,cblas,atlas not found in /usr/lib
  libraries lapack_atlas not found in /usr/lib
numpy.distutils.system_info.atlas_info
  NOT AVAILABLE

/usr/local/lib64/python2.5/site-packages/numpy/distutils/system_info.py:1295:
UserWarning:
    Atlas (http://math-atlas.sourceforge.net/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [atlas]) or by setting
    the ATLAS environment variable.
  warnings.warn(AtlasNotFoundError.__doc__)
lapack_info:
  libraries lapack not found in /usr/local/lib64
  libraries lapack not found in /usr/local/lib
  FOUND:
    libraries = ['lapack']
    library_dirs = ['/usr/lib64']
    language = f77

  FOUND:
    libraries = ['lapack', 'blas']
    library_dirs = ['/usr/lib64']
    define_macros = [('NO_ATLAS_INFO', 1)]
    language = f77

umfpack_info:
  libraries umfpack not found in /usr/local/lib64
  libraries umfpack not found in /usr/local/lib
  libraries umfpack not found in /usr/lib64
  libraries umfpack not found in /usr/lib
/usr/local/lib64/python2.5/site-packages/numpy/distutils/system_info.py:452:
UserWarning:
    UMFPACK sparse solver (http://www.cise.ufl.edu/research/sparse/umfpack/)
    not found. Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [umfpack]) or by setting
    the UMFPACK environment variable.
  warnings.warn(self.notfounderror.__doc__)
  NOT AVAILABLE

running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands
--compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands
--fcompiler options
running build_src
building py_modules sources
building library "dfftpack" sources
building library "linpack_lite" sources
building library "mach" sources
building library "quadpack" sources
building library "odepack" sources
building library "fitpack" sources
building library "odrpack" sources
building library "minpack" sources
building library "rootfind" sources
building library "superlu_src" sources
building library "arpack" sources
building library "sc_c_misc" sources
building library "sc_cephes" sources
building library "sc_mach" sources
building library "sc_toms" sources
building library "sc_amos" sources
building library "sc_cdf" sources
building library "sc_specfun" sources
building library "statlib" sources
building extension "scipy.cluster._vq" sources
building extension "scipy.cluster._hierarchy_wrap" sources
building extension "scipy.fftpack._fftpack" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.fftpack.convolve" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.integrate._quadpack" sources
building extension "scipy.integrate._odepack" sources
building extension "scipy.integrate.vode" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.interpolate._fitpack" sources
building extension "scipy.interpolate.dfitpack" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
  adding 'build/src.linux-x86_64-2.5/scipy/interpolate/src/dfitpack-f2pywrappers.f'
to sources.
building extension "scipy.interpolate._interpolate" sources
building extension "scipy.io.numpyio" sources
building extension "scipy.lib.blas.fblas" sources
f2py options: ['skip:', ':']
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
  adding 'build/src.linux-x86_64-2.5/build/src.linux-x86_64-2.5/scipy/lib/blas/fblas-f2pywrappers.f'
to sources.
building extension "scipy.lib.blas.cblas" sources
  adding 'build/src.linux-x86_64-2.5/scipy/lib/blas/cblas.pyf' to sources.
f2py options: ['skip:', ':']
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.lib.lapack.flapack" sources
f2py options: ['skip:', ':']
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.lib.lapack.clapack" sources
  adding 'build/src.linux-x86_64-2.5/scipy/lib/lapack/clapack.pyf' to sources.
f2py options: ['skip:', ':']
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.lib.lapack.calc_lwork" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.lib.lapack.atlas_version" sources
building extension "scipy.linalg.fblas" sources
  adding 'build/src.linux-x86_64-2.5/scipy/linalg/fblas.pyf' to sources.
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
  adding 'build/src.linux-x86_64-2.5/build/src.linux-x86_64-2.5/scipy/linalg/fblas-f2pywrappers.f'
to sources.
building extension "scipy.linalg.cblas" sources
  adding 'build/src.linux-x86_64-2.5/scipy/linalg/cblas.pyf' to sources.
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.linalg.flapack" sources
  adding 'build/src.linux-x86_64-2.5/scipy/linalg/flapack.pyf' to sources.
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
  adding 'build/src.linux-x86_64-2.5/build/src.linux-x86_64-2.5/scipy/linalg/flapack-f2pywrappers.f'
to sources.
building extension "scipy.linalg.clapack" sources
  adding 'build/src.linux-x86_64-2.5/scipy/linalg/clapack.pyf' to sources.
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.linalg._flinalg" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.linalg.calc_lwork" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.linalg.atlas_version" sources
building extension "scipy.odr.__odrpack" sources
building extension "scipy.optimize._minpack" sources
building extension "scipy.optimize._zeros" sources
building extension "scipy.optimize._lbfgsb" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.optimize.moduleTNC" sources
building extension "scipy.optimize._cobyla" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.optimize.minpack2" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.optimize._slsqp" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.optimize._nnls" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.signal.sigtools" sources
building extension "scipy.signal.spline" sources
building extension "scipy.sparse.linalg.isolve._iterative" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.sparse.linalg.dsolve._zsuperlu" sources
building extension "scipy.sparse.linalg.dsolve._dsuperlu" sources
building extension "scipy.sparse.linalg.dsolve._csuperlu" sources
building extension "scipy.sparse.linalg.dsolve._ssuperlu" sources
building extension "scipy.sparse.linalg.dsolve.umfpack.__umfpack" sources
building extension "scipy.sparse.linalg.eigen.arpack._arpack" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
  adding 'build/src.linux-x86_64-2.5/build/src.linux-x86_64-2.5/scipy/sparse/linalg/eigen/arpack/_arpack-f2pywrappers.f'
to sources.
building extension "scipy.sparse.sparsetools._csr" sources
building extension "scipy.sparse.sparsetools._csc" sources
building extension "scipy.sparse.sparsetools._coo" sources
building extension "scipy.sparse.sparsetools._bsr" sources
building extension "scipy.sparse.sparsetools._dia" sources
building extension "scipy.spatial.ckdtree" sources
building extension "scipy.spatial._distance_wrap" sources
building extension "scipy.special._cephes" sources
building extension "scipy.special.specfun" sources
f2py options: ['--no-wrap-functions']
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.stats.statlib" sources
f2py options: ['--no-wrap-functions']
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.stats.vonmises_cython" sources
building extension "scipy.stats.futil" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
building extension "scipy.stats.mvn" sources
f2py options: []
  adding 'build/src.linux-x86_64-2.5/fortranobject.c' to sources.
  adding 'build/src.linux-x86_64-2.5' to include_dirs.
  adding 'build/src.linux-x86_64-2.5/scipy/stats/mvn-f2pywrappers.f' to sources.
building extension "scipy.ndimage._nd_image" sources
building data_files sources
running build_py
copying scipy/version.py -> build/lib.linux-x86_64-2.5/scipy
copying build/src.linux-x86_64-2.5/scipy/__config__.py ->
build/lib.linux-x86_64-2.5/scipy
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
customize GnuFCompiler
Could not locate executable g77
Could not locate executable f77
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize LaheyFCompiler
Could not locate executable lf95
customize PGroupFCompiler
Could not locate executable pgf90
Could not locate executable pgf77
customize AbsoftFCompiler
Could not locate executable f90
customize NAGFCompiler
Could not locate executable f95
customize VastFCompiler
customize GnuFCompiler
customize CompaqFCompiler
Could not locate executable fort
customize IntelItaniumFCompiler
Could not locate executable efort
Could not locate executable efc
customize IntelEM64TFCompiler
customize Gnu95FCompiler
Found executable /usr/bin/gfortran
customize Gnu95FCompiler
customize Gnu95FCompiler using build_clib
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
extending extension 'scipy.sparse.linalg.dsolve._zsuperlu'
defined_macros with [('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.sparse.linalg.dsolve._dsuperlu'
defined_macros with [('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.sparse.linalg.dsolve._csuperlu'
defined_macros with [('USE_VENDOR_BLAS', 1)]
extending extension 'scipy.sparse.linalg.dsolve._ssuperlu'
defined_macros with [('USE_VENDOR_BLAS', 1)]
customize UnixCCompiler
customize UnixCCompiler using build_ext
customize GnuFCompiler
customize IntelFCompiler
customize LaheyFCompiler
customize PGroupFCompiler
customize AbsoftFCompiler
customize NAGFCompiler
customize VastFCompiler
customize GnuFCompiler
customize CompaqFCompiler
customize IntelItaniumFCompiler
customize IntelEM64TFCompiler
customize Gnu95FCompiler
customize Gnu95FCompiler
customize Gnu95FCompiler using build_ext
running scons
running install_lib
copying build/lib.linux-x86_64-2.5/scipy/cluster/_vq.so ->
/usr/local/lib64/python2.5/site-packages/scipy/cluster
copying build/lib.linux-x86_64-2.5/scipy/cluster/_hierarchy_wrap.so ->
/usr/local/lib64/python2.5/site-packages/scipy/cluster
copying build/lib.linux-x86_64-2.5/scipy/fftpack/_fftpack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/fftpack
copying build/lib.linux-x86_64-2.5/scipy/fftpack/convolve.so ->
/usr/local/lib64/python2.5/site-packages/scipy/fftpack
copying build/lib.linux-x86_64-2.5/scipy/integrate/_quadpack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/integrate
copying build/lib.linux-x86_64-2.5/scipy/integrate/_odepack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/integrate
copying build/lib.linux-x86_64-2.5/scipy/integrate/vode.so ->
/usr/local/lib64/python2.5/site-packages/scipy/integrate
copying build/lib.linux-x86_64-2.5/scipy/interpolate/_fitpack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/interpolate
copying build/lib.linux-x86_64-2.5/scipy/interpolate/dfitpack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/interpolate
copying build/lib.linux-x86_64-2.5/scipy/interpolate/_interpolate.so
-> /usr/local/lib64/python2.5/site-packages/scipy/interpolate
copying build/lib.linux-x86_64-2.5/scipy/io/numpyio.so ->
/usr/local/lib64/python2.5/site-packages/scipy/io
copying build/lib.linux-x86_64-2.5/scipy/lib/blas/fblas.so ->
/usr/local/lib64/python2.5/site-packages/scipy/lib/blas
copying build/lib.linux-x86_64-2.5/scipy/lib/blas/cblas.so ->
/usr/local/lib64/python2.5/site-packages/scipy/lib/blas
copying build/lib.linux-x86_64-2.5/scipy/lib/lapack/flapack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/lib/lapack
copying build/lib.linux-x86_64-2.5/scipy/lib/lapack/clapack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/lib/lapack
copying build/lib.linux-x86_64-2.5/scipy/lib/lapack/calc_lwork.so ->
/usr/local/lib64/python2.5/site-packages/scipy/lib/lapack
copying build/lib.linux-x86_64-2.5/scipy/lib/lapack/atlas_version.so
-> /usr/local/lib64/python2.5/site-packages/scipy/lib/lapack
copying build/lib.linux-x86_64-2.5/scipy/linalg/fblas.so ->
/usr/local/lib64/python2.5/site-packages/scipy/linalg
copying build/lib.linux-x86_64-2.5/scipy/linalg/cblas.so ->
/usr/local/lib64/python2.5/site-packages/scipy/linalg
copying build/lib.linux-x86_64-2.5/scipy/linalg/flapack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/linalg
copying build/lib.linux-x86_64-2.5/scipy/linalg/clapack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/linalg
copying build/lib.linux-x86_64-2.5/scipy/linalg/_flinalg.so ->
/usr/local/lib64/python2.5/site-packages/scipy/linalg
copying build/lib.linux-x86_64-2.5/scipy/linalg/calc_lwork.so ->
/usr/local/lib64/python2.5/site-packages/scipy/linalg
copying build/lib.linux-x86_64-2.5/scipy/linalg/atlas_version.so ->
/usr/local/lib64/python2.5/site-packages/scipy/linalg
copying build/lib.linux-x86_64-2.5/scipy/odr/__odrpack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/odr
copying build/lib.linux-x86_64-2.5/scipy/optimize/_minpack.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/optimize/_zeros.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/optimize/_lbfgsb.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/optimize/moduleTNC.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/optimize/_cobyla.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/optimize/minpack2.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/optimize/_slsqp.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/optimize/_nnls.so ->
/usr/local/lib64/python2.5/site-packages/scipy/optimize
copying build/lib.linux-x86_64-2.5/scipy/signal/sigtools.so ->
/usr/local/lib64/python2.5/site-packages/scipy/signal
copying build/lib.linux-x86_64-2.5/scipy/signal/spline.so ->
/usr/local/lib64/python2.5/site-packages/scipy/signal
copying build/lib.linux-x86_64-2.5/scipy/sparse/linalg/isolve/_iterative.so
-> /usr/local/lib64/python2.5/site-packages/scipy/sparse/linalg/isolve
copying build/lib.linux-x86_64-2.5/scipy/sparse/linalg/dsolve/_zsuperlu.so
-> /usr/local/lib64/python2.5/site-packages/scipy/sparse/linalg/dsolve
copying build/lib.linux-x86_64-2.5/scipy/sparse/linalg/dsolve/_dsuperlu.so
-> /usr/local/lib64/python2.5/site-packages/scipy/sparse/linalg/dsolve
copying build/lib.linux-x86_64-2.5/scipy/sparse/linalg/dsolve/_csuperlu.so
-> /usr/local/lib64/python2.5/site-packages/scipy/sparse/linalg/dsolve
copying build/lib.linux-x86_64-2.5/scipy/sparse/linalg/dsolve/_ssuperlu.so
-> /usr/local/lib64/python2.5/site-packages/scipy/sparse/linalg/dsolve
copying build/lib.linux-x86_64-2.5/scipy/sparse/linalg/eigen/arpack/_arpack.so
-> /usr/local/lib64/python2.5/site-packages/scipy/sparse/linalg/eigen/arpack
copying build/lib.linux-x86_64-2.5/scipy/sparse/sparsetools/_csr.so ->
/usr/local/lib64/python2.5/site-packages/scipy/sparse/sparsetools
copying build/lib.linux-x86_64-2.5/scipy/sparse/sparsetools/_csc.so ->
/usr/local/lib64/python2.5/site-packages/scipy/sparse/sparsetools
copying build/lib.linux-x86_64-2.5/scipy/sparse/sparsetools/_coo.so ->
/usr/local/lib64/python2.5/site-packages/scipy/sparse/sparsetools
copying build/lib.linux-x86_64-2.5/scipy/sparse/sparsetools/_bsr.so ->
/usr/local/lib64/python2.5/site-packages/scipy/sparse/sparsetools
copying build/lib.linux-x86_64-2.5/scipy/sparse/sparsetools/_dia.so ->
/usr/local/lib64/python2.5/site-packages/scipy/sparse/sparsetools
copying build/lib.linux-x86_64-2.5/scipy/spatial/ckdtree.so ->
/usr/local/lib64/python2.5/site-packages/scipy/spatial
copying build/lib.linux-x86_64-2.5/scipy/spatial/_distance_wrap.so ->
/usr/local/lib64/python2.5/site-packages/scipy/spatial
copying build/lib.linux-x86_64-2.5/scipy/special/_cephes.so ->
/usr/local/lib64/python2.5/site-packages/scipy/special
copying build/lib.linux-x86_64-2.5/scipy/special/specfun.so ->
/usr/local/lib64/python2.5/site-packages/scipy/special
copying build/lib.linux-x86_64-2.5/scipy/stats/statlib.so ->
/usr/local/lib64/python2.5/site-packages/scipy/stats
copying build/lib.linux-x86_64-2.5/scipy/stats/vonmises_cython.so ->
/usr/local/lib64/python2.5/site-packages/scipy/stats
copying build/lib.linux-x86_64-2.5/scipy/stats/futil.so ->
/usr/local/lib64/python2.5/site-packages/scipy/stats
copying build/lib.linux-x86_64-2.5/scipy/stats/mvn.so ->
/usr/local/lib64/python2.5/site-packages/scipy/stats
copying build/lib.linux-x86_64-2.5/scipy/ndimage/_nd_image.so ->
/usr/local/lib64/python2.5/site-packages/scipy/ndimage
copying build/lib.linux-x86_64-2.5/scipy/version.py ->
/usr/local/lib64/python2.5/site-packages/scipy
copying build/lib.linux-x86_64-2.5/scipy/__config__.py ->
/usr/local/lib64/python2.5/site-packages/scipy
running install_data
running install_egg_info
Removing /usr/local/lib64/python2.5/site-packages/scipy-0.7.1rc3-py2.5.egg-info
Writing /usr/local/lib64/python2.5/site-packages/scipy-0.7.1rc3-py2.5.egg-info





>>> import scipy
>>> scipy.test()
Running unit tests for scipy-0.0.0-py2.5-linux-x86_64.egg.scipy
NumPy version 1.4.0.dev7073
NumPy is installed in /usr/local/lib64/python2.5/site-packages/numpy
SciPy version 0.7.1rc3
SciPy is installed in
/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy
Python version 2.5 (r25:51908, Aug  1 2008, 00:36:28) [GCC 4.1.2
20061115 (prerelease) (SUSE Linux)]
nose version 0.11.1
/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/linsolve/__init__.py:4:
DeprecationWarning: scipy.linsolve has moved to
scipy.sparse.linalg.dsolve
  warn('scipy.linsolve has moved to scipy.sparse.linalg.dsolve',
DeprecationWarning)
EEEEEEEEEEEEEE
======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/fftpack/__init__.py",
line 10, in <module>
    from basic import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/fftpack/basic.py",
line 13, in <module>
    import _fftpack as fftpack
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/integrate/__init__.py",
line 9, in <module>
    from quadrature import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/integrate/quadrature.py",
line 5, in <module>
    from scipy.special.orthogonal import p_roots
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/__init__.py",
line 8, in <module>
    from basic import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/basic.py",
line 8, in <module>
    from _cephes import *
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/interpolate/__init__.py",
line 7, in <module>
    from interpolate import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/interpolate/interpolate.py",
line 13, in <module>
    import scipy.special as spec
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/__init__.py",
line 8, in <module>
    from basic import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/basic.py",
line 8, in <module>
    from _cephes import *
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/lib/blas/__init__.py",
line 9, in <module>
    import fblas
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/lib/lapack/__init__.py",
line 9, in <module>
    import calc_lwork
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/linalg/__init__.py",
line 8, in <module>
    from basic import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/linalg/basic.py",
line 17, in <module>
    from lapack import get_lapack_funcs
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/linalg/lapack.py",
line 17, in <module>
    from scipy.linalg import flapack
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/linsolve/__init__.py",
line 6, in <module>
    from scipy.sparse.linalg.dsolve import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/sparse/linalg/__init__.py",
line 5, in <module>
    from isolve import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/sparse/linalg/isolve/__init__.py",
line 4, in <module>
    from iterative import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/sparse/linalg/isolve/iterative.py",
line 5, in <module>
    import _iterative
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/maxentropy/__init__.py",
line 9, in <module>
    from maxentropy import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/maxentropy/maxentropy.py",
line 74, in <module>
    from scipy import optimize
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/optimize/__init__.py",
line 7, in <module>
    from optimize import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/optimize/optimize.py",
line 28, in <module>
    import linesearch
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/optimize/linesearch.py",
line 3, in <module>
    from scipy.optimize import minpack2
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/odr/__init__.py",
line 11, in <module>
    import odrpack
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/odr/odrpack.py",
line 103, in <module>
    from scipy.odr import __odrpack
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/optimize/__init__.py",
line 7, in <module>
    from optimize import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/optimize/optimize.py",
line 28, in <module>
    import linesearch
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/optimize/linesearch.py",
line 3, in <module>
    from scipy.optimize import minpack2
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/signal/__init__.py",
line 9, in <module>
    from bsplines import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/signal/bsplines.py",
line 3, in <module>
    import scipy.special
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/__init__.py",
line 8, in <module>
    from basic import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/basic.py",
line 8, in <module>
    from _cephes import *
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/sparse/linalg/__init__.py",
line 5, in <module>
    from isolve import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/sparse/linalg/isolve/__init__.py",
line 4, in <module>
    from iterative import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/sparse/linalg/isolve/iterative.py",
line 5, in <module>
    import _iterative
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/__init__.py",
line 8, in <module>
    from basic import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/basic.py",
line 8, in <module>
    from _cephes import *
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

======================================================================
ERROR: Failure: ImportError (libg2c.so.0: cannot open shared object
file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/loader.py",
line 379, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 39, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/local/lib64/python2.5/site-packages/nose-0.11.1-py2.5.egg/nose/importer.py",
line 86, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/stats/__init__.py",
line 7, in <module>
    from stats import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/stats/stats.py",
line 198, in <module>
    import scipy.special as special
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/__init__.py",
line 8, in <module>
    from basic import *
  File "/usr/local/lib64/python2.5/site-packages/scipy-0.0.0-py2.5-linux-x86_64.egg/scipy/special/basic.py",
line 8, in <module>
    from _cephes import *
ImportError: libg2c.so.0: cannot open shared object file: No such file
or directory

----------------------------------------------------------------------
Ran 14 tests in 0.031s

FAILED (errors=14)
<nose.result.TextTestResult run=14 errors=14 failures=0>
>>>


More information about the SciPy-user mailing list