[SciPy-User] ANN: SciPy 0.11.0 release

Ralf Gommers ralf.gommers@gmail....
Thu Sep 27 11:32:17 CDT 2012


On Thu, Sep 27, 2012 at 4:01 PM, Robert Pyle <rpyle@post.harvard.edu> wrote:

> Hi,
>
> I ran into a segfault with AnacondaCE on OSX 10.8.2
>
> $ python
> Python 2.7.3 AnacondaCE (default, Sep  4 2012, 10:42:42)
> [GCC 4.0.1 (Apple Inc. build 5493)] on darwin
> Type "help", "copyright", "credits" or "license" for more information.
> >>> import scipy as sp
> >>> sp.test()
> Running unit tests for scipy
> NumPy version 1.7.0b2
> NumPy is installed in /opt/anaconda/lib/python2.7/site-packages/numpy
> SciPy version 0.11.0
> SciPy is installed in /opt/anaconda/lib/python2.7/site-packages/scipy
> Python version 2.7.3 AnacondaCE (default, Sep  4 2012, 10:42:42) [GCC
> 4.0.1 (Apple Inc. build 5493)]
> nose version 1.1.2
> .....................................................................................................................................................................................F.FFFSegmentation
> fault: 11
>

Could you run the tests with "scipy.test(verbose=2) to see where the issue
occurs?


> I installed 0.11.0rc2 which seems to run fine for my purposes but where
> scipy.test() gives
>

Did you install both rc2 and final from the dmgs on SourceForge with
macosx-10.6 in the name?


> FAILED (KNOWNFAIL=13, SKIP=29, errors=11, failures=73)
> <nose.result.TextTestResult run=5484 errors=11 failures=73>
>
> I attach a zipped file of the error log, in case that's useful.
>

The test errors/failures in that log are all known. The
IndexError/ValueError ones are because of an issue in numpy 1.7.0b2, which
should be fixed before the final 1.7.0 release. The other ones are due to
issues with Apple's Accelerate Framework. So doesn't look related.

Can anyone comment on how Anaconda CE was built? I can imagine problems
could occur if it was built on OS X 10.7 or 10.8 while scipy 0.11.0 was
built on OS X 10.6.

Ralf



>
> And a heartfelt thanks to all who work on this.  You make my life so much
> easier!
>
> Bob Pyle
> Cambridge, MA
>
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