array from list of lists
Erin Sheldon
erin.sheldon at gmail.com
Mon Nov 13 09:10:42 CST 2006
On 11/13/06, Francesc Altet <faltet at carabos.com> wrote:
> In any case, you can also use rec.fromrecords for build recarrays from
> lists of lists. This breaks the aforementioned rule, but Travis allowed
> this because rec.* had to mimic numarray behaviour as much as possible.
> Here is an example of use:
>
> In [46]:mydescriptor = {'names': ('gender','age','weight'),
> 'formats':('S1','f4', 'f4')}
> In [47]:results=[['M',64.0,75.0],['F',25.0,60.0]]
> In [48]:a = numpy.rec.fromrecords(results, dtype=mydescriptor)
> In [49]:b = numpy.array([tuple(row) for row in results],
> dtype=mydescriptor)
> In [50]:a==b
> Out[50]:recarray([True, True], dtype=bool)
>
> OTOH, it is said in the docs that fromrecords is discouraged because it
> is somewhat slow, but apparently it has similar performance than using
> comprehensions lists:
>
> In [51]:Timer("numpy.rec.fromrecords(results, dtype=mydescriptor)",
> "import numpy; results = [['M',64.0,75.0]]*10000; mydescriptor =
> {'names': ('gender','age','weight'), 'formats':('S1','f4',
> 'f4')}").repeat(3,10)
> Out[51]:[0.44204592704772949, 0.43584394454956055, 0.50145101547241211]
>
> In [52]:Timer("numpy.array([tuple(row) for row in results],
> dtype=mydescriptor)", "import numpy; results = [['M',64.0,75.0]]*10000;
> mydescriptor = {'names': ('gender','age','weight'),
> 'formats':('S1','f4', 'f4')}").repeat(3,10)
> Out[52]:[0.49885106086730957, 0.4325258731842041, 0.43297886848449707]
I checked the code. For lists of lists it just creates the recarray
and runs a loop copying in the data row by row.
The fact that they are of similar speed is actually good news
because the list comprehension was making an
extra copy of the data in memory. For large memory usage,
which is my case, this 50% overhead would have been an issue.
Erin
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