[SciPy-dev] lstsq segfaults for scipy 0.9.5, numpy 0.9.5 on python 2.3

Albert Huang ashuang at gmail.com
Tue Mar 21 13:00:08 CST 2006


I'm using numpy 0.9.5 and scipy 0.9.5 with python 2.3 on a debian (unstable)

scipy.linalg.lstsq segfaults when I run this program:

file:  testlstsq.py
from numpy import *
from scipy.linalg import lstsq

a = array( ((1,1), (1.1,0.9), (0.9,1.1), (0.8,1.2)) )
b = array( (2,2,2,2) )

print lstsq(a,b)

stack trace:
# gdb python
GNU gdb 6.3-debian
Copyright 2004 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "i386-linux"...(no debugging symbols found)
Using host libthread_db library "/lib/tls/libthread_db.so.1".

(gdb) run testlstsq.py
Starting program: /usr/bin/python testlstsq.py
(no debugging symbols found)
(no debugging symbols found)
[Thread debugging using libthread_db enabled]
[New Thread -1209723200 (LWP 32526)]
(no debugging symbols found)
(no debugging symbols found)
(no debugging symbols found)
(no debugging symbols found)
(no debugging symbols found)
(no debugging symbols found)
(no debugging symbols found)
(no debugging symbols found)

Program received signal SIGSEGV, Segmentation fault.
[Switching to Thread -1209723200 (LWP 32526)]
0x08089aab in PyType_IsSubtype ()
(gdb) where
#0  0x08089aab in PyType_IsSubtype ()
#1  0xb7cd4941 in PyUFunc_GenericReduction (self=0x819aa20, args=0xb6c1d2ac,

    kwds=0x0, operation=0) at ufuncobject.c:2388
#2  0x08058c4e in PyObject_Call ()
#3  0xb7d14d2a in PyArray_GenericReduceFunction (m1=0x828ed78, op=0x819aa20,

    axis=Variable "axis" is not available.
) at arrayobject.c:2465
#4  0xb7d2151b in PyArray_All (self=0x8, axis=1)
    at numpy/core/src/multiarraymodule.c:617
#5  0xb6d0cde7 in array_from_pyobj (type_num=12, dims=0xbf8ee02c, rank=1,
    intent=12, obj=0x8113500) at build/src/fortranobject.c:523
#6  0xb6cf3012 in f2py_rout_flapack_dgelss (capi_self=0xb77627e8,
    capi_args=0xb6dde4cc, capi_keywds=0xb6c1ecec,
    f2py_func=0xb7281d40 <dgelss_>)
    at build/src/build/src/Lib/lib/lapack/flapackmodule.c:2896
#7  0xb6d0c671 in fortran_call (fp=0xb77627e8, arg=0xb6dde4cc,
    at build/src/fortranobject.c:267
#8  0x08058c4e in PyObject_Call ()
#9  0x080b437f in PyEval_GetFuncName ()
#10 0x080b8417 in PyEval_EvalCodeEx ()
#11 0x080b6b64 in PyEval_GetFuncName ()
#12 0x080b8417 in PyEval_EvalCodeEx ()
#13 0x080b8695 in PyEval_EvalCode ()
#14 0x080d935c in PyRun_FileExFlags ()
#15 0x080d9623 in PyRun_SimpleFileExFlags ()
#16 0x08054fc7 in Py_Main ()
#17 0xb7e67ed0 in __libc_start_main () from /lib/tls/libc.so.6
#18 0x080549a1 in _start ()

Any suggestions?
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