[SciPy-User] 3d convex hull
Pauli Virtanen
pav@iki...
Sat Aug 27 02:53:56 CDT 2011
Wed, 24 Aug 2011 23:56:36 +0800, Ning Guo wrote:
> I also want to try Delaunay function. But I cannot get enough info from
> the documentation. I want to output the Delaunay tetrahedral in 3D and
> need the vertex indices, facet areas and normals. How can I use the
> function in scipy.spatial? Now I have all the points with id and
> position.
Suppose you have 20 points in 3-D:
import numpy as np
import scipy.spatial
points = np.random.rand(20, 3)
tri = scipy.spatial.Delaunay(points)
The indices of the vertices of tetrahedron number `j` are
in `tri.vertices[j]`. The facet areas and normals can be computed
for each tetrahedron via vector cross products:
tetra_points = tri.points[tri.vertices] # (N, 4, 3) array
face_normals = np.empty_like(tetra_points)
face_normals[:,0] = np.cross(tetra_points[:,0], tetra_points[:,1])
face_normals[:,1] = np.cross(tetra_points[:,0], tetra_points[:,2])
face_normals[:,2] = np.cross(tetra_points[:,0], tetra_points[:,3])
face_normals[:,3] = np.cross(tetra_points[:,1], tetra_points[:,2])
face_normal_lengths = np.sqrt(np.sum(face_normals**2, axis=2))
face_normals /= face_normal_lengths[:,:,np.newaxis]
face_areas = 0.5 * face_normal_lengths
One important point I don't know at the moment is if those normals
actually point away from the center of the tetrahedra. You'd have
to check the Qhull documentation to check whether they have a winding
convention that guarantees certain ordering of the vertices of
the simplices.
(Note: the above is untested code, so check it works first :)
--
Pauli Virtanen
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