[SciPy-User] Spyder-Ubuntu 12.04 problem with SciPy 0.11.0rc1
Sun Jul 22 04:20:35 CDT 2012
On 22-Jul-2012 09:14, Scott Sinclair wrote:
> On Jul 21, 2012 1:19 PM, "Virgil Stokes" <firstname.lastname@example.org <mailto:email@example.com>> wrote:
> > I installed SciPy 0.11.0rc1 on an Ubuntu 12.04 (64-bit) platform with what
> > seemed to be no problems.
> > However, when I ran Spyder it still was using SciPy 0.10.1. I then tried to
> > uninstall SciPy completely using
> > >pip uninstall SciPy
> > which again seemed to be ok. But, now I was unable to execute Spyder! I tried
> > several times to uninstall and reinstall Spyder but I am stuck with no
> > possibility to run Spyder. I get no error; but, clicking in this application in
> > Ubuntu 12.04 seems to be ignored.
> > Any suggestions as to how to recover Spyder and how to get SciPy running again
> > would be appreciated.
> I don't know about Spyder (I don't use it and you haven't given much
> information about how you tried to un/reinstall it). I suspect it was via the
> package manager?
> Did you run pip uninstall with sudo?
> What happens when you run:
> python -c "import scipy; print scipy.__version__; print scipy"
> at the command line?
> If you get an import error for scipy try reinstalling python-scipy from the
> package manager.
> SciPy-User mailing list
I tried some more things; but, first here is what I get when I try to run Spyder
from a command line:
Traceback (most recent call last):
File "/usr/local/bin/spyder", line 2, in <module>
from spyderlib import spyder
File "/usr/local/lib/python2.7/dist-packages/spyderlib/spyder.py", line 91,
from spyderlib.utils.environ import WinUserEnvDialog
line 17, in <module>
from spyderlib.widgets.dicteditor import DictEditor
31, in <module>
from spyderlib.config import get_icon, get_font
File "/usr/local/lib/python2.7/dist-packages/spyderlib/config.py", line 27,
from spyderlib.utils import iofuncs, codeanalysis
line 33, in <module>
import scipy.io as spio
File "/usr/local/lib/python2.7/dist-packages/scipy/io/__init__.py", line 83,
from matlab import loadmat, savemat, byteordercodes
line 11, in <module>
from mio import loadmat, savemat
File "/usr/local/lib/python2.7/dist-packages/scipy/io/matlab/mio.py", line
15, in <module>
from mio4 import MatFile4Reader, MatFile4Writer
File "/usr/local/lib/python2.7/dist-packages/scipy/io/matlab/mio4.py", line
9, in <module>
File "/usr/local/lib/python2.7/dist-packages/scipy/sparse/__init__.py", line
182, in <module>
from csgraph import *
AttributeError: 'module' object has no attribute 'csgraph_to_masked'
I installed scipy-0.10.1 and then tried to run Spyder --- the following crash
report was generated:
The crashed program seems to use third-party or local libraries:
It is highly recommended to check if the problem persists without those first.
Do you want to continue the report process anyway?
Interestingly, a search for csgraph in the file system gives nothing.
Do you have any suggestions as to how to fix Spyder-SciPy?
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